6sd6: Difference between revisions

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==Structure of VapBC from Shigella sonnei==
<StructureSection load='6sd6' size='340' side='right'caption='[[6sd6]]' scene=''>
<StructureSection load='6sd6' size='340' side='right'caption='[[6sd6]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
<table><tr><td colspan='2'>[[6sd6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_sonnei Shigella sonnei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SD6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SD6 FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6sd6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sd6 OCA], [http://pdbe.org/6sd6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6sd6 RCSB], [http://www.ebi.ac.uk/pdbsum/6sd6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6sd6 ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sd6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sd6 OCA], [https://pdbe.org/6sd6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sd6 RCSB], [https://www.ebi.ac.uk/pdbsum/6sd6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sd6 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H9P9N5_SHISO A0A0H9P9N5_SHISO] Toxic component of a toxin-antitoxin (TA) system. A site-specific tRNA-(fMet) endonuclease, it cleaves both charged and uncharged tRNA-(fMet) between positions 38 and 39 at the anticodon stem-loop boundary. Its toxic effects are neutralized by expression of cognate antitoxin VapB.[HAMAP-Rule:MF_00265]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Z-disk]]
[[Category: Shigella sonnei]]
[[Category: Hollingshead S]]
[[Category: Lea SM]]

Latest revision as of 15:39, 24 January 2024

Structure of VapBC from Shigella sonneiStructure of VapBC from Shigella sonnei

Structural highlights

6sd6 is a 4 chain structure with sequence from Shigella sonnei. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.61Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A0H9P9N5_SHISO Toxic component of a toxin-antitoxin (TA) system. A site-specific tRNA-(fMet) endonuclease, it cleaves both charged and uncharged tRNA-(fMet) between positions 38 and 39 at the anticodon stem-loop boundary. Its toxic effects are neutralized by expression of cognate antitoxin VapB.[HAMAP-Rule:MF_00265]

6sd6, resolution 2.61Å

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