5ovc: Difference between revisions

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 ==PDZ domain from rat Shank3 bound to the C terminus of GKAP==
-<StructureSection load='5ovc' size='340' side='right' caption='[[5ovc]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+<StructureSection load='5ovc' size='340' side='right'caption='[[5ovc]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ovc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OVC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OVC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ovc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OVC FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Shank3, Prosap2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ovc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ovc OCA], [https://pdbe.org/5ovc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ovc RCSB], [https://www.ebi.ac.uk/pdbsum/5ovc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ovc ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ovc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ovc OCA], [http://pdbe.org/5ovc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ovc RCSB], [http://www.ebi.ac.uk/pdbsum/5ovc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ovc ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/SHAN3_RAT SHAN3_RAT]] Seems to be an adapter protein in the postsynaptic density (PSD) of excitatory synapses that interconnects receptors of the postsynaptic membrane including NMDA-type and metabotropic glutamate receptors via complexes with GKAP/PSD-95 and Homer, respectively, and the actin-based cytoskeleton. May play a role in the structural and functional organization of the dendritic spine and synaptic junction.
+[https://www.uniprot.org/uniprot/SHAN3_RAT SHAN3_RAT] Seems to be an adapter protein in the postsynaptic density (PSD) of excitatory synapses that interconnects receptors of the postsynaptic membrane including NMDA-type and metabotropic glutamate receptors via complexes with GKAP/PSD-95 and Homer, respectively, and the actin-based cytoskeleton. May play a role in the structural and functional organization of the dendritic spine and synaptic junction.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 5ovc" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Shank protein|Shank protein]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Buffalo rat]]
+[[Category: Large Structures]]
-[[Category: Boeckers, T M]]
+[[Category: Rattus norvegicus]]
-[[Category: Kursula, P]]
+[[Category: Boeckers TM]]
-[[Category: Myllykoski, M]]
+[[Category: Kursula P]]
-[[Category: Ponna, S K]]
+[[Category: Myllykoski M]]
-[[Category: C terminus]]
+[[Category: Ponna SK]]
-[[Category: Pdz domain]]
-[[Category: Peptide binding]]
-[[Category: Post-synaptic density]]
-[[Category: Protein binding]]