1ul4: Difference between revisions

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==Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4==
==Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4==
<StructureSection load='1ul4' size='340' side='right'caption='[[1ul4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1ul4' size='340' side='right'caption='[[1ul4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ul4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UL4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UL4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ul4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UL4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UL4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPL4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ul4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ul4 OCA], [https://pdbe.org/1ul4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ul4 RCSB], [https://www.ebi.ac.uk/pdbsum/1ul4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ul4 ProSAT], [https://www.topsan.org/Proteins/RSGI/1ul4 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ul4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ul4 OCA], [https://pdbe.org/1ul4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ul4 RCSB], [https://www.ebi.ac.uk/pdbsum/1ul4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ul4 ProSAT], [https://www.topsan.org/Proteins/RSGI/1ul4 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/SPL4_ARATH SPL4_ARATH]] Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Promotes both vegetative phase change and flowering.<ref>PMID:10524240</ref> <ref>PMID:16914499</ref>
[https://www.uniprot.org/uniprot/SPL4_ARATH SPL4_ARATH] Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Promotes both vegetative phase change and flowering.<ref>PMID:10524240</ref> <ref>PMID:16914499</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Inoue, M]]
[[Category: Inoue M]]
[[Category: Kigawa, T]]
[[Category: Kigawa T]]
[[Category: Structural genomic]]
[[Category: Yamasaki K]]
[[Category: Yamasaki, K]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S]]
[[Category: Dna binding protein]]
[[Category: Flower development]]
[[Category: Rsgi]]
[[Category: Sbp]]
[[Category: Transcription factor]]

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