4anr: Difference between revisions
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<StructureSection load='4anr' size='340' side='right'caption='[[4anr]], [[Resolution|resolution]] 1.84Å' scene=''> | <StructureSection load='4anr' size='340' side='right'caption='[[4anr]], [[Resolution|resolution]] 1.84Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4anr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[4anr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ANR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ANR FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4anr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4anr OCA], [https://pdbe.org/4anr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4anr RCSB], [https://www.ebi.ac.uk/pdbsum/4anr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4anr ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4anr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4anr OCA], [https://pdbe.org/4anr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4anr RCSB], [https://www.ebi.ac.uk/pdbsum/4anr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4anr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9HX24_PSEAE Q9HX24_PSEAE] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: | [[Category: Pseudomonas aeruginosa PAO1]] | ||
[[Category: Breukink | [[Category: Breukink E]] | ||
[[Category: Dessen | [[Category: Dessen A]] | ||
[[Category: Izore | [[Category: Izore T]] | ||
[[Category: Job | [[Category: Job V]] | ||
[[Category: Nikolaidis | [[Category: Nikolaidis I]] | ||
[[Category: Thielens | [[Category: Thielens N]] | ||
Latest revision as of 14:31, 20 December 2023
Crystal structure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosaCrystal structure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa
Structural highlights
FunctionPublication Abstract from PubMedIn Gram-negative bacteria, the bacterial cell wall biosynthetic mechanism requires the coordinated action of enzymes and structural proteins located in the cytoplasm, within the membrane, and in the periplasm of the cell. Its main component, peptidoglycan (PG), is essential for cell division and wall elongation. Penicillin-binding proteins (PBPs) catalyze the last steps of PG biosynthesis, namely the polymerization of glycan chains and the cross-linking of stem peptides, and can be either monofunctional or bifunctional. Their action is coordinated with that of other enzymes essential for cell-wall biosynthesis, such as lytic transglycosylases (LT). Here, we have studied SltB1, an LT from Pseudomonas aeruginosa, and identified that it forms a complex with PBP2, a monofunctional enzyme, which requires the presence of Ca(2+). In addition, we have solved the structure of SltB1 to a high resolution, and identified that it harbors an EF-hand like motif containing a Ca(2+) ion displaying bipyramidal coordination. These studies provide initial structural details that shed light on the interactions between the PG biosynthesis enzymes in P. aeruginosa. Calcium-Dependent Complex Formation Between PBP2 and Lytic Transglycosylase SltB1 of Pseudomonas aeruginosa.,Nikolaidis I, Izore T, Job V, Thielens N, Breukink E, Dessen A Microb Drug Resist. 2012 Mar 20. PMID:22432706[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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