2xpd: Difference between revisions

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<StructureSection load='2xpd' size='340' side='right'caption='[[2xpd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2xpd' size='340' side='right'caption='[[2xpd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2xpd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Yerpy Yerpy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XPD FirstGlance]. <br>
<table><tr><td colspan='2'>[[2xpd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_YPIII Yersinia pseudotuberculosis YPIII]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XPD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTU:(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL'>DTU</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2xpe|2xpe]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTU:(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL'>DTU</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peroxiredoxin Peroxiredoxin], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.15 1.11.1.15] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xpd OCA], [https://pdbe.org/2xpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xpd RCSB], [https://www.ebi.ac.uk/pdbsum/2xpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xpd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xpd OCA], [https://pdbe.org/2xpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xpd RCSB], [https://www.ebi.ac.uk/pdbsum/2xpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xpd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/Q66A71_YERPS Q66A71_YERPS]] Has antioxidant activity. Could remove peroxides or H(2)O(2) (By similarity).[HAMAP-Rule:MF_00269]  
[https://www.uniprot.org/uniprot/A0A0H3B2F9_YERPY A0A0H3B2F9_YERPY] Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.[HAMAP-Rule:MF_00269]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Thiol peroxidase|Thiol peroxidase]]
*[[Thiol peroxidase 3D structures|Thiol peroxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Peroxiredoxin]]
[[Category: Yersinia pseudotuberculosis YPIII]]
[[Category: Yerpy]]
[[Category: Elofsson M]]
[[Category: Elofsson, M]]
[[Category: Gabrielsen M]]
[[Category: Gabrielsen, M]]
[[Category: Roe AJ]]
[[Category: Roe, A J]]
[[Category: Wang D]]
[[Category: Wang, D]]
[[Category: Zetterstrom CE]]
[[Category: Zetterstrom, C E]]
[[Category: Oxidoreductase]]
[[Category: Ros protection]]
[[Category: Thioredoxin-fold]]

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