5opt: Difference between revisions

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<SX load='5opt' size='340' side='right' viewer='molstar' caption='[[5opt]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
<SX load='5opt' size='340' side='right' viewer='molstar' caption='[[5opt]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5opt]] is a 35 chain structure with sequence from [http://en.wikipedia.org/wiki/Trycc Trycc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OPT OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5OPT FirstGlance]. <br>
<table><tr><td colspan='2'>[[5opt]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_cruzi_strain_CL_Brener Trypanosoma cruzi strain CL Brener]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OPT FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tc00.1047053511211.120, Tc00.1047053511211.130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511291.90 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506963.14, Tc00.1047053511233.14, Tc00.1047053511277.175 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053503801.20, Tc00.1047053508817.60 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511237.60 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053409117.20, Tc00.1047053506945.230, Tc00.1047053508823.50 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511001.9, Tc00.1047053511001.18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053508319.70, Tc00.1047053508405.40 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053507681.150, Tc00.1047053507681.160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511903.110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053504163.30, Tc00.1047053506401.120 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506025.14, Tc00.1047053511209.54, Tc00.1047053511805.15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053510425.19 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053503833.40, Tc00.1047053506213.60, Tc00.1047053511287.120, Tc00.1047053511287.40 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506297.330 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053510101.420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053504105.94, Tc00.1047053509233.190 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053503395.50, Tc00.1047053506181.59 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053510409.39 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053510769.49 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053508827.70 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053508475.10, Tc00.1047053508823.120, Tc00.1047053508823.140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053503899.20, Tc00.1047053503899.30 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053504021.109, Tc00.1047053507677.39, Tc00.1047053509353.30 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506679.140, Tc00.1047053506679.150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053510879.20 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053507019.83, Tc00.1047053507019.86 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511727.270 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053511809.130, Tc00.1047053511809.99, Tc00.1047053511811.10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506679.100, Tc00.1047053506679.94 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053509683.117, Tc00.1047053511051.39, Tc00.1047053511051.50 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053504181.20, Tc00.1047053504181.30, Tc00.1047053509695.180, Tc00.1047053509695.184 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506297.150, Tc00.1047053506297.160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC]), Tc00.1047053506593.30 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353153 TRYCC])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5opt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5opt OCA], [http://pdbe.org/5opt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5opt RCSB], [http://www.ebi.ac.uk/pdbsum/5opt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5opt ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5opt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5opt OCA], [https://pdbe.org/5opt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5opt RCSB], [https://www.ebi.ac.uk/pdbsum/5opt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5opt ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q4CQ63_TRYCC Q4CQ63_TRYCC]] Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.[HAMAP-Rule:MF_03015]  
[https://www.uniprot.org/uniprot/Q4DTN2_TRYCC Q4DTN2_TRYCC]  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</SX>
</SX>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Trycc]]
[[Category: Trypanosoma cruzi strain CL Brener]]
[[Category: Bochler, A]]
[[Category: Bochler A]]
[[Category: Chicher, J]]
[[Category: Brito Querido J]]
[[Category: Hashem, Y]]
[[Category: Chicher J]]
[[Category: Mancera-Martinez, E]]
[[Category: Hashem Y]]
[[Category: Querido, J Brito]]
[[Category: Mancera-Martinez E]]
[[Category: Simonetti, A]]
[[Category: Simonetti A]]
[[Category: Vicens, Q]]
[[Category: Vicens Q]]
[[Category: Cryo-em]]
[[Category: Kinetoplastid]]
[[Category: Ksrp]]
[[Category: Ribosome]]

Revision as of 19:57, 13 December 2023

Structure of KSRP in context of Trypanosoma cruzi 40SStructure of KSRP in context of Trypanosoma cruzi 40S

5opt, resolution 4.00Å

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OCA
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