5of2: Difference between revisions

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 ==The structural versatility of TasA in B. subtilis biofilm formation==
-<StructureSection load='5of2' size='340' side='right' caption='[[5of2]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
+<StructureSection load='5of2' size='340' side='right'caption='[[5of2]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5of2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OF2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OF2 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5of2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OF2 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tasA, cotN, yqhF, BSU24620 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5of2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5of2 OCA], [http://pdbe.org/5of2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5of2 RCSB], [http://www.ebi.ac.uk/pdbsum/5of2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5of2 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5of2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5of2 OCA], [https://pdbe.org/5of2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5of2 RCSB], [https://www.ebi.ac.uk/pdbsum/5of2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5of2 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/TASA_BACSU TASA_BACSU] TasA is the major protein component of the biofilm extracellular matrix (PubMed:16430696, PubMed:20080671). It forms amyloid fibers that bind cells together in the biofilm (PubMed:20080671). Exhibits an antibacterial activity against a variety of Gram-positive and Gram-negative bacteria (PubMed:10049401). In laboratory strains, is also involved in proper spore coat assembly (PubMed:10368135).<ref>PMID:10049401</ref> <ref>PMID:10368135</ref> <ref>PMID:16430696</ref> <ref>PMID:20080671</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 17: / Line 19: @@
 </div>
 <div class="pdbe-citations 5of2" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bacsu]]
+[[Category: Bacillus subtilis subsp. subtilis str. 168]]
-[[Category: Akbey, U]]
+[[Category: Large Structures]]
-[[Category: Ball, L]]
+[[Category: Akbey U]]
-[[Category: Chowdhury, A]]
+[[Category: Ball L]]
-[[Category: Cremer, N]]
+[[Category: Chowdhury A]]
-[[Category: Diehl, A]]
+[[Category: Cremer N]]
-[[Category: Eisenmenger, F]]
+[[Category: Diehl A]]
-[[Category: Heinemann, U]]
+[[Category: Eisenmenger F]]
-[[Category: Hiller, M]]
+[[Category: Heinemann U]]
-[[Category: Kramer, R]]
+[[Category: Hiller M]]
-[[Category: Leidert, M]]
+[[Category: Kramer R]]
-[[Category: Lopez, D]]
+[[Category: Leidert M]]
-[[Category: Moliere, N]]
+[[Category: Lopez D]]
-[[Category: Nagaraj, M]]
+[[Category: Moliere N]]
-[[Category: Oschkinat, H]]
+[[Category: Nagaraj M]]
-[[Category: Roske, Y]]
+[[Category: Oschkinat H]]
-[[Category: Schlegel, B]]
+[[Category: Roske Y]]
-[[Category: Schmieder, P]]
+[[Category: Schlegel B]]
-[[Category: Stoeppler, D]]
+[[Category: Schmieder P]]
-[[Category: Turgay, K]]
+[[Category: Stoeppler D]]
-[[Category: Worth, C L]]
+[[Category: Turgay K]]
-[[Category: Amyloid fiber]]
+[[Category: Worth CL]]
-[[Category: Biofilm matrix]]
-[[Category: Protein fibril]]
-[[Category: Tasa]]
-[[Category: Xray structure]]