7ber: Difference between revisions

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<StructureSection load='7ber' size='340' side='right'caption='[[7ber]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='7ber' size='340' side='right'caption='[[7ber]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[7ber]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BER FirstGlance]. <br>
<table><tr><td colspan='2'>[[7ber]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BER FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MYD88 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ber FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ber OCA], [https://pdbe.org/7ber PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ber RCSB], [https://www.ebi.ac.uk/pdbsum/7ber PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ber ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ber FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ber OCA], [https://pdbe.org/7ber PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ber RCSB], [https://www.ebi.ac.uk/pdbsum/7ber PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ber ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN]] Defects in MYD88 are the cause of MYD88 deficiency (MYD88D) [MIM:[https://omim.org/entry/612260 612260]]; also known as recurrent pyogenic bacterial infections due to MYD88 deficiency. Patients suffer from autosomal recessive, life-threatening, often recurrent pyogenic bacterial infections, including invasive pneumococcal disease, and die between 1 and 11 months of age. Surviving patients are otherwise healthy, with normal resistance to other microbes, and their clinical status improved with age.<ref>PMID:19506249</ref> <ref>PMID:18669862</ref>
[https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN] Defects in MYD88 are the cause of MYD88 deficiency (MYD88D) [MIM:[https://omim.org/entry/612260 612260]; also known as recurrent pyogenic bacterial infections due to MYD88 deficiency. Patients suffer from autosomal recessive, life-threatening, often recurrent pyogenic bacterial infections, including invasive pneumococcal disease, and die between 1 and 11 months of age. Surviving patients are otherwise healthy, with normal resistance to other microbes, and their clinical status improved with age.<ref>PMID:19506249</ref> <ref>PMID:18669862</ref>  
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN]] Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Increases IL-8 transcription. Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes (By similarity).<ref>PMID:9013863</ref> <ref>PMID:15361868</ref> <ref>PMID:18292575</ref> <ref>PMID:19506249</ref>
[https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN] Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Increases IL-8 transcription. Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes (By similarity).<ref>PMID:9013863</ref> <ref>PMID:15361868</ref> <ref>PMID:18292575</ref> <ref>PMID:19506249</ref>  
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
<div class="pdbe-citations 7ber" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7ber" style="background-color:#fffaf0;"></div>
==See Also==
*[[TIR domain-containing adapter protein|TIR domain-containing adapter protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Abbey, B]]
[[Category: Abbey B]]
[[Category: Aquila, A]]
[[Category: Aquila A]]
[[Category: Clabbers, M T.B]]
[[Category: Clabbers MTB]]
[[Category: Croll, T I]]
[[Category: Croll TI]]
[[Category: Darmanin, C]]
[[Category: Darmanin C]]
[[Category: Gambin, Y]]
[[Category: Gambin Y]]
[[Category: Holmes, S]]
[[Category: Holmes S]]
[[Category: Hunter, D J.B]]
[[Category: Hunter DJB]]
[[Category: Hunter, M S]]
[[Category: Hunter MS]]
[[Category: Kobe, B]]
[[Category: Kobe B]]
[[Category: Liang, M]]
[[Category: Liang M]]
[[Category: Malde, A K]]
[[Category: Malde AK]]
[[Category: Muusse, T W]]
[[Category: Muusse TW]]
[[Category: Nanson, J D]]
[[Category: Nanson JD]]
[[Category: Rahaman, M H]]
[[Category: Rahaman MH]]
[[Category: Sierecki, E]]
[[Category: Sierecki E]]
[[Category: Thygesen, S J]]
[[Category: Thygesen SJ]]
[[Category: Vajjhala, P]]
[[Category: Vajjhala P]]
[[Category: Ve, T]]
[[Category: Ve T]]
[[Category: Xu, H]]
[[Category: Xu H]]
[[Category: Yoon, C H]]
[[Category: Yoon CH]]
[[Category: Zatsepin, N A]]
[[Category: Zatsepin NA]]
[[Category: Zhao, J]]
[[Category: Zhao J]]
[[Category: Higher-order assembly]]
[[Category: Myd88]]
[[Category: Protein binding]]
[[Category: Serial femtosecond crystallography]]
[[Category: Sfx]]
[[Category: Tir domain]]

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