2vrj: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='2vrj' size='340' side='right'caption='[[2vrj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2vrj' size='340' side='right'caption='[[2vrj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2vrj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRJ FirstGlance]. <br>
<table><tr><td colspan='2'>[[2vrj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRJ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NCW:(1S,2R,3S,4R,5R)-2,3,4-TRIHYDROXY-N-OCTYL-6-OXA-8-AZABICYCLO[3.2.1]OCTANE-8-CARBOTHIOAMIDE'>NCW</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2j78|2j78]], [[1w3j|1w3j]], [[2j75|2j75]], [[2j7g|2j7g]], [[2jal|2jal]], [[2j7e|2j7e]], [[2j7h|2j7h]], [[2cbu|2cbu]], [[1oin|1oin]], [[2j7c|2j7c]], [[2j7b|2j7b]], [[2cet|2cet]], [[1oif|1oif]], [[2j79|2j79]], [[1uz1|1uz1]], [[1od0|1od0]], [[2ces|2ces]], [[2j7d|2j7d]], [[2j7f|2j7f]], [[1oim|1oim]], [[2j77|2j77]], [[2cbv|2cbv]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NCW:(1S,2R,3S,4R,5R)-2,3,4-TRIHYDROXY-N-OCTYL-6-OXA-8-AZABICYCLO[3.2.1]OCTANE-8-CARBOTHIOAMIDE'>NCW</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrj OCA], [https://pdbe.org/2vrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vrj RCSB], [https://www.ebi.ac.uk/pdbsum/2vrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrj OCA], [https://pdbe.org/2vrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vrj RCSB], [https://www.ebi.ac.uk/pdbsum/2vrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrj ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BGLA_THEMA BGLA_THEMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43589]]
[[Category: Beta-glucosidase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Aguilar, M]]
[[Category: Thermotoga maritima]]
[[Category: Casas, J]]
[[Category: Aguilar M]]
[[Category: Davies, G J]]
[[Category: Casas J]]
[[Category: Egido-Gabas, M]]
[[Category: Davies GJ]]
[[Category: Fernandez, J M.Garcia]]
[[Category: Egido-Gabas M]]
[[Category: Garcia-Moreno, M I]]
[[Category: Garcia Fernandez JM]]
[[Category: Gloster, T M]]
[[Category: Garcia-Moreno MI]]
[[Category: Llebaria, A]]
[[Category: Gloster TM]]
[[Category: Mellet, C Ortiz]]
[[Category: Llebaria A]]
[[Category: Calystegine]]
[[Category: Ortiz Mellet C]]
[[Category: Carbohydrate metabolism]]
[[Category: Cellulose degradation]]
[[Category: Family 1]]
[[Category: Glycosidase]]
[[Category: Glycoside hydrolase]]
[[Category: Hydrolase]]
[[Category: Inhibitor]]
[[Category: Polysaccharide degradation]]

Latest revision as of 18:29, 13 December 2023

Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegineBeta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegine

Structural highlights

2vrj is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BGLA_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2vrj, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2vrj&oldid=3988210"