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==== | ==Structure of Human Parainfluenza Virus 3 Unassembled Nucleoprotein in Complex with its viral chaperone== | ||
<StructureSection load='7ev8' size='340' side='right'caption='[[7ev8]]' scene=''> | <StructureSection load='7ev8' size='340' side='right'caption='[[7ev8]], [[Resolution|resolution]] 3.23Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | <table><tr><td colspan='2'>[[7ev8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_parainfluenza_3_virus_(strain_NIH_47885) Human parainfluenza 3 virus (strain NIH 47885)] and [https://en.wikipedia.org/wiki/Human_respirovirus_3 Human respirovirus 3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EV8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EV8 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ev8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ev8 OCA], [https://pdbe.org/7ev8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ev8 RCSB], [https://www.ebi.ac.uk/pdbsum/7ev8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ev8 ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.234Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ev8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ev8 OCA], [https://pdbe.org/7ev8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ev8 RCSB], [https://www.ebi.ac.uk/pdbsum/7ev8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ev8 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/PHOSP_PI3H4 PHOSP_PI3H4] Essential component of the RNA polymerase and the nascent chain assembly complex. Also required during RNA synthesis. | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Human parainfluenza virus 3 (HPIV3) belongs to the Paramyxoviridae, causing annual worldwide epidemics of respiratory diseases, especially in newborns and infants. The core components consist of just three viral proteins: nucleoprotein (N), phosphoprotein (P), and RNA polymerase (L), playing essential roles in replication and transcription of HPIV3 as well as other paramyxoviruses. Viral genome encapsidated by N is as a template and recognized by RNA-dependent RNA polymerase complex composed of L and P. The offspring RNA also needs to assemble with N to form nucleocapsids. The N is one of the most abundant viral proteins in infected cells and chaperoned in the RNA-free form (N(0)) by P before encapsidation. In this study, we presented the structure of unassembled HPIV3 N(0) in complex with the N-terminal portion of the P, revealing the molecular details of the N(0) and the conserved N(0)-P interaction. Combined with biological experiments, we showed that the P binds to the C-terminal domain of N(0) mainly by hydrophobic interaction and maintains the unassembled conformation of N by interfering with the formation of N-RNA oligomers, which might be a target for drug development. Based on the complex structure, we developed a method to obtain the monomeric N(0). Furthermore, we designed a P-derived fusion peptide with 10-fold higher affinity, which hijacked the N and interfered with the binding of the N to RNA significantly. Finally, we proposed a model of conformational transition of N from the unassembled state to the assembled state, which helped to further understand viral replication. IMPORTANCE Human parainfluenza virus 3 (HPIV3) causes annual epidemics of respiratory diseases, especially in newborns and infants. For the replication of HPIV3 and other paramyxoviruses, only three viral proteins are required: phosphoprotein (P), RNA polymerase (L), and nucleoprotein (N). Here, we report the crystal structure of the complex of N and its chaperone P. We describe in detail how P acts as a chaperone to maintain the unassembled conformation of N. Our analysis indicated that the interaction between P and N is conserved and mediated by hydrophobicity, which can be used as a target for drug development. We obtained a high-affinity P-derived peptide inhibitor, specifically targeted N, and greatly interfered with the binding of the N to RNA, thereby inhibiting viral encapsidation and replication. In summary, our results provide new insights into the paramyxovirus genome replication and nucleocapsid assembly and lay the basis for drug development. | |||
Structural Basis of Human Parainfluenza Virus 3 Unassembled Nucleoprotein in Complex with Its Viral Chaperone.,Dong X, Wang X, Xie M, Wu W, Chen Z J Virol. 2022 Jan 26;96(2):e0164821. doi: 10.1128/JVI.01648-21. Epub 2021 Nov 3. PMID:34730394<ref>PMID:34730394</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 7ev8" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Human respirovirus 3]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Z | [[Category: Chen Z]] | ||
[[Category: Dong XF]] |
Latest revision as of 20:04, 29 November 2023
Structure of Human Parainfluenza Virus 3 Unassembled Nucleoprotein in Complex with its viral chaperoneStructure of Human Parainfluenza Virus 3 Unassembled Nucleoprotein in Complex with its viral chaperone
Structural highlights
FunctionPHOSP_PI3H4 Essential component of the RNA polymerase and the nascent chain assembly complex. Also required during RNA synthesis. Publication Abstract from PubMedHuman parainfluenza virus 3 (HPIV3) belongs to the Paramyxoviridae, causing annual worldwide epidemics of respiratory diseases, especially in newborns and infants. The core components consist of just three viral proteins: nucleoprotein (N), phosphoprotein (P), and RNA polymerase (L), playing essential roles in replication and transcription of HPIV3 as well as other paramyxoviruses. Viral genome encapsidated by N is as a template and recognized by RNA-dependent RNA polymerase complex composed of L and P. The offspring RNA also needs to assemble with N to form nucleocapsids. The N is one of the most abundant viral proteins in infected cells and chaperoned in the RNA-free form (N(0)) by P before encapsidation. In this study, we presented the structure of unassembled HPIV3 N(0) in complex with the N-terminal portion of the P, revealing the molecular details of the N(0) and the conserved N(0)-P interaction. Combined with biological experiments, we showed that the P binds to the C-terminal domain of N(0) mainly by hydrophobic interaction and maintains the unassembled conformation of N by interfering with the formation of N-RNA oligomers, which might be a target for drug development. Based on the complex structure, we developed a method to obtain the monomeric N(0). Furthermore, we designed a P-derived fusion peptide with 10-fold higher affinity, which hijacked the N and interfered with the binding of the N to RNA significantly. Finally, we proposed a model of conformational transition of N from the unassembled state to the assembled state, which helped to further understand viral replication. IMPORTANCE Human parainfluenza virus 3 (HPIV3) causes annual epidemics of respiratory diseases, especially in newborns and infants. For the replication of HPIV3 and other paramyxoviruses, only three viral proteins are required: phosphoprotein (P), RNA polymerase (L), and nucleoprotein (N). Here, we report the crystal structure of the complex of N and its chaperone P. We describe in detail how P acts as a chaperone to maintain the unassembled conformation of N. Our analysis indicated that the interaction between P and N is conserved and mediated by hydrophobicity, which can be used as a target for drug development. We obtained a high-affinity P-derived peptide inhibitor, specifically targeted N, and greatly interfered with the binding of the N to RNA, thereby inhibiting viral encapsidation and replication. In summary, our results provide new insights into the paramyxovirus genome replication and nucleocapsid assembly and lay the basis for drug development. Structural Basis of Human Parainfluenza Virus 3 Unassembled Nucleoprotein in Complex with Its Viral Chaperone.,Dong X, Wang X, Xie M, Wu W, Chen Z J Virol. 2022 Jan 26;96(2):e0164821. doi: 10.1128/JVI.01648-21. Epub 2021 Nov 3. PMID:34730394[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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