7eq9: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='7eq9' size='340' side='right'caption='[[7eq9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='7eq9' size='340' side='right'caption='[[7eq9]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[7eq9]] is a 60 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EQ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EQ9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[7eq9]] is a 60 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EQ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EQ9 FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7eq9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7eq9 OCA], [https://pdbe.org/7eq9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7eq9 RCSB], [https://www.ebi.ac.uk/pdbsum/7eq9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7eq9 ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7eq9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7eq9 OCA], [https://pdbe.org/7eq9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7eq9 RCSB], [https://www.ebi.ac.uk/pdbsum/7eq9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7eq9 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 20: Line 21:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Arai, R]]
[[Category: Synthetic construct]]
[[Category: Kawakami, N]]
[[Category: Arai R]]
[[Category: Kikkawa, M]]
[[Category: Kawakami N]]
[[Category: Miyamoto, K]]
[[Category: Kikkawa M]]
[[Category: Obata, J]]
[[Category: Miyamoto K]]
[[Category: Tsutsumi, A]]
[[Category: Obata J]]
[[Category: Artificial designed protein complex]]
[[Category: Tsutsumi A]]
[[Category: De novo protein]]
[[Category: Virus like particle]]

Latest revision as of 19:59, 29 November 2023

Cryo-EM structure of designed protein nanoparticle TIP60 (Truncated Icosahedral Protein composed of 60-mer fusion proteins)Cryo-EM structure of designed protein nanoparticle TIP60 (Truncated Icosahedral Protein composed of 60-mer fusion proteins)

Structural highlights

7eq9 is a 60 chain structure with sequence from Synthetic construct. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.3Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Supramolecular protein nanoparticles and nanocages have potential in a broad range of applications. Recently, we developed a uniform supramolecular protein nanoparticle, TIP60, symmmetrically self-assembled from fusion proteins of a pentameric Sm-like protein and a dimeric MyoX-coil domain. Herein, we report the icosahedral 60-meric structure of TIP60 solved using single-particle cryo-electron microscopy. Interestingly, the structure revealed 20 regular-triangle-like pores on the surface. TIP60 and its mutants have many modifiable sites on their exterior and interior surfaces. The TIP60 architecture will be useful in the development of biomedical and biochemical nanoparticles/nanocages for future applications.

Icosahedral 60-meric porous structure of designed supramolecular protein nanoparticle TIP60.,Obata J, Kawakami N, Tsutsumi A, Nasu E, Miyamoto K, Kikkawa M, Arai R Chem Commun (Camb). 2021 Oct 5;57(79):10226-10229. doi: 10.1039/d1cc03114g. PMID:34523636[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Obata J, Kawakami N, Tsutsumi A, Nasu E, Miyamoto K, Kikkawa M, Arai R. Icosahedral 60-meric porous structure of designed supramolecular protein nanoparticle TIP60. Chem Commun (Camb). 2021 Oct 5;57(79):10226-10229. doi: 10.1039/d1cc03114g. PMID:34523636 doi:http://dx.doi.org/10.1039/d1cc03114g

7eq9, resolution 3.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA