4bai: Difference between revisions

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<StructureSection load='4bai' size='340' side='right'caption='[[4bai]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='4bai' size='340' side='right'caption='[[4bai]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4bai]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BAI FirstGlance]. <br>
<table><tr><td colspan='2'>[[4bai]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BAI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ztb|1ztb]], [[4baj|4baj]]</div></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Chorismate_synthase Chorismate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.5 4.2.3.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bai OCA], [https://pdbe.org/4bai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bai RCSB], [https://www.ebi.ac.uk/pdbsum/4bai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bai ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bai OCA], [https://pdbe.org/4bai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bai RCSB], [https://www.ebi.ac.uk/pdbsum/4bai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bai ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AROC_MYCTU AROC_MYCTU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Chorismate synthase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Panjikar, S]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Pereira, P J.B]]
[[Category: Panjikar S]]
[[Category: Royant, A]]
[[Category: Pereira PJB]]
[[Category: Sanctis, D de]]
[[Category: Royant A]]
[[Category: Lyase]]
[[Category: De Sanctis D]]

Latest revision as of 12:10, 15 November 2023

Mycobacterium tuberculosis Chorismate synthase before exposure to 266 nm UV laserMycobacterium tuberculosis Chorismate synthase before exposure to 266 nm UV laser

Structural highlights

4bai is a 1 chain structure with sequence from Mycobacterium tuberculosis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AROC_MYCTU

Publication Abstract from PubMed

Selenomethionine labeling is the most common technique used in protein crystallography to derivatize recombinant proteins for experimental phasing using anomalous scattering at tunable synchrotron beamlines. Recently, it has been shown that UV radiation depletes electron density of selenium atoms of selenomethionine residues and that UV radiation- damage induced phasing (equivalent to single isomorphous replacement) protocol can be applied to calculate experimental phases. Here we present the straightforward integration of a UV source with an in-house diffractometer. We show how this setup can extend the capabilities of a sealed tube X-ray generator and be used for experimental phasing of selenium-labeled proteins.

In-house UV radiation damage induced phasing of selenomethionine-labeled protein structures.,Pereira PJ, Royant A, Panjikar S, de Sanctis D J Struct Biol. 2012 Nov 20. pii: S1047-8477(12)00315-2. doi:, 10.1016/j.jsb.2012.11.003. PMID:23178456[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Pereira PJ, Royant A, Panjikar S, de Sanctis D. In-house UV radiation damage induced phasing of selenomethionine-labeled protein structures. J Struct Biol. 2012 Nov 20. pii: S1047-8477(12)00315-2. doi:, 10.1016/j.jsb.2012.11.003. PMID:23178456 doi:http://dx.doi.org/10.1016/j.jsb.2012.11.003

4bai, resolution 2.30Å

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