3tdf: Difference between revisions

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<StructureSection load='3tdf' size='340' side='right'caption='[[3tdf]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
<StructureSection load='3tdf' size='340' side='right'caption='[[3tdf]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3tdf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acib2 Acib2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TDF FirstGlance]. <br>
<table><tr><td colspan='2'>[[3tdf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_ATCC_19606_=_CIP_70.34_=_JCM_6841 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TDF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2KT:2-KETOBUTYRIC+ACID'>2KT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3rk8|3rk8]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2KT:2-KETOBUTYRIC+ACID'>2KT</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhdps, HMPREF0010_03414 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=575584 ACIB2])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tdf OCA], [https://pdbe.org/3tdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tdf RCSB], [https://www.ebi.ac.uk/pdbsum/3tdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tdf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tdf OCA], [https://pdbe.org/3tdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tdf RCSB], [https://www.ebi.ac.uk/pdbsum/3tdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tdf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/D0CFC3_ACIBA D0CFC3_ACIBA]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) (By similarity).[SAAS:SAAS020625_004_011311][HAMAP-Rule:MF_00418]  
[https://www.uniprot.org/uniprot/D0CFC3_ACIB2 D0CFC3_ACIB2] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
[[Category: Acinetobacter baumannii ATCC 19606 = CIP 70 34 = JCM 6841]]
[[Category: Acib2]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Kaur, P]]
[[Category: Kaur P]]
[[Category: Kaushik, S]]
[[Category: Kaushik S]]
[[Category: Kumar, M]]
[[Category: Kumar M]]
[[Category: Sharma, S]]
[[Category: Sharma S]]
[[Category: Singh, T P]]
[[Category: Singh TP]]
[[Category: Sinha, M]]
[[Category: Sinha M]]
[[Category: Tewari, R]]
[[Category: Tewari R]]
[[Category: 2-ketobutanoic acid]]
[[Category: Dhdp]]
[[Category: Lyase]]
[[Category: Lysine biosynthesis]]
[[Category: Tim barrel]]

Latest revision as of 20:31, 1 November 2023

Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolutionCrystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution

Structural highlights

3tdf is a 2 chain structure with sequence from Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.99Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

D0CFC3_ACIB2 Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]

See Also

3tdf, resolution 1.99Å

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