3n8f: Difference between revisions

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 <StructureSection load='3n8f' size='340' side='right'caption='[[3n8f]], [[Resolution|resolution]] 3.25&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3n8f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N8F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3N8F FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3n8f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N8F FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.25&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ojv|2ojv]], [[2e9e|2e9e]], [[2eha|2eha]], [[3nak|3nak]], [[3niu|3niu]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n8f OCA], [https://pdbe.org/3n8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n8f RCSB], [https://www.ebi.ac.uk/pdbsum/3n8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n8f ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3n8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n8f OCA], [http://pdbe.org/3n8f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3n8f RCSB], [http://www.ebi.ac.uk/pdbsum/3n8f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3n8f ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/PERL_CAPHI PERL_CAPHI] Antimicrobial agent which utilizes hydrogen peroxide and thiocyanate (SCN) to generate the antimicrobial substance hypothiocyanous acid (HOSCN) (PubMed:10894086). May protect the udder from infection and promote growth in newborns. Inhibits growth of several fungi including A.niger, Trichoderma species, C.cassicola, P.meadii and C.salmonicolor (PubMed:10894086). Does not have anti-fungal activity towards C.albicans and Pythium species (PubMed:10894086). Inhibits growth of several Gram-positive bacteria including some Staphylococcus species and Gram-negative bacteria including E.coli, P.aeruginosa and some Salmonella species (PubMed:10894086).<ref>PMID:10894086</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 23: / Line 23: @@
 ==See Also==
 *[[Lactoperoxidase|Lactoperoxidase]]
+== References ==
+<references/>
 __TOC__
 </StructureSection>
 [[Category: Capra hircus]]
 [[Category: Large Structures]]
-[[Category: Peroxidase]]
+[[Category: Kaur P]]
-[[Category: Kaur, P]]
+[[Category: Sharma S]]
-[[Category: Sharma, S]]
+[[Category: Singh AK]]
-[[Category: Singh, A K]]
+[[Category: Singh RP]]
-[[Category: Singh, R P]]
+[[Category: Singh TP]]
-[[Category: Singh, T P]]
+[[Category: Sinha M]]
-[[Category: Sinha, M]]
+[[Category: Vikram G]]
-[[Category: Vikram, G]]
-[[Category: Complex]]
-[[Category: Lactoperoxidase]]
-[[Category: Metal binding protein]]
-[[Category: Milk protein]]
-[[Category: Nitrate]]
-[[Category: Oxidoreductase]]
-[[Category: Thiocyanate]]