3iwv: Difference between revisions
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<StructureSection load='3iwv' size='340' side='right'caption='[[3iwv]], [[Resolution|resolution]] 1.68Å' scene=''> | <StructureSection load='3iwv' size='340' side='right'caption='[[3iwv]], [[Resolution|resolution]] 1.68Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3iwv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[3iwv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IWV FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.68Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iwv OCA], [https://pdbe.org/3iwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iwv RCSB], [https://www.ebi.ac.uk/pdbsum/3iwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iwv ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iwv OCA], [https://pdbe.org/3iwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iwv RCSB], [https://www.ebi.ac.uk/pdbsum/3iwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iwv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/HIUH_DANRE HIUH_DANRE] Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Danio rerio]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Berni | [[Category: Berni R]] | ||
[[Category: Cendron | [[Category: Cendron L]] | ||
[[Category: Percudani | [[Category: Percudani R]] | ||
[[Category: Ramazzina | [[Category: Ramazzina I]] | ||
[[Category: Zanotti | [[Category: Zanotti G]] | ||
Latest revision as of 19:03, 1 November 2023
Crystal structure of Y116T mutant of 5-HYDROXYISOURATE HYDROLASE (TRP)Crystal structure of Y116T mutant of 5-HYDROXYISOURATE HYDROLASE (TRP)
Structural highlights
FunctionHIUH_DANRE Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMed5-Hydroxyisourate hydrolase (HIUase) and transthyretin (TTR) are closely related phylogenetically and structurally, while performing quite different functions. The former catalyzes the hydrolysis of 5-hydroxyisourate within the urate degradation pathway, and the latter is a carrier protein involved in the extracellular transport of thyroid hormones and in the cotransport of retinol. The evolution of HIUase into TTR represents a remarkable example of adaptation of a new function by active-site modification of an enzyme. On the basis of phylogenetic reconstructions and structural comparison of HIUase and TTR, two mutations (Y116T and I16A) were likely to be crucial events in order to induce, after a gene duplication event, the conversion of the enzyme into a binding protein. By rational reshaping of the active sites of HIUase and functional analyses of its mutant forms, we have provided insights into how its neofunctionalization could be achieved. We show here that the two mutations at the active sites of HIUase open up the two ends of the channel that transverses the entire tetrameric protein, generating two cavities accessible to the thyroxine molecule and abrogating, at the same time, the enzymatic activity. Our data indicate that a small number of critical mutations affecting the active site of an enzyme may be sufficient to generate a drastically different function, while a large number of additional mutations may be required for the fine-tuning of the structural and functional features of new proteins. Probing the evolution of hydroxyisourate hydrolase into transthyretin through active-site redesign.,Cendron L, Ramazzina I, Percudani R, Rasore C, Zanotti G, Berni R J Mol Biol. 2011 Jun 17;409(4):504-12. Epub 2011 Apr 16. PMID:21515285[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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