3bld: Difference between revisions
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<StructureSection load='3bld' size='340' side='right'caption='[[3bld]], [[Resolution|resolution]] 1.19Å' scene=''> | <StructureSection load='3bld' size='340' side='right'caption='[[3bld]], [[Resolution|resolution]] 1.19Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3bld]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[3bld]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BLD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BLD FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.19Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRF:7-DEAZA-7-AMINOMETHYL-GUANINE'>PRF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id=' | |||
< | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bld FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bld OCA], [https://pdbe.org/3bld PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bld RCSB], [https://www.ebi.ac.uk/pdbsum/3bld PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bld ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bld FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bld OCA], [https://pdbe.org/3bld PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bld RCSB], [https://www.ebi.ac.uk/pdbsum/3bld PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bld ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/TGT_ZYMMO TGT_ZYMMO] Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_00168] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[TRNA-guanine transglycosylase|TRNA-guanine transglycosylase]] | *[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Heine | [[Category: Zymomonas mobilis]] | ||
[[Category: Klebe | [[Category: Heine A]] | ||
[[Category: Reuter | [[Category: Klebe G]] | ||
[[Category: Tidten | [[Category: Reuter K]] | ||
[[Category: Tidten N]] | |||