2zr3: Difference between revisions

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<StructureSection load='2zr3' size='340' side='right'caption='[[2zr3]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='2zr3' size='340' side='right'caption='[[2zr3]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2zr3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2dq2 2dq2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZR3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2zr3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2dq2 2dq2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZR3 FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2dq0|2dq0]], [[2zr2|2zr2]]</div></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH0710 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70601 Pyrococcus horikoshii])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine--tRNA_ligase Serine--tRNA ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.11 6.1.1.11] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zr3 OCA], [https://pdbe.org/2zr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zr3 RCSB], [https://www.ebi.ac.uk/pdbsum/2zr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zr3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2zr3 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zr3 OCA], [https://pdbe.org/2zr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zr3 RCSB], [https://www.ebi.ac.uk/pdbsum/2zr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zr3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2zr3 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/SYS_PYRHO SYS_PYRHO]] Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity).  
[https://www.uniprot.org/uniprot/SYS_PYRHO SYS_PYRHO] Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Serine--tRNA ligase]]
[[Category: Itoh Y]]
[[Category: Itoh, Y]]
[[Category: Sekine S]]
[[Category: Structural genomic]]
[[Category: Yokoyama S]]
[[Category: Sekine, S]]
[[Category: Yokoyama, S]]
[[Category: Aminoacyl-trna synthetase]]
[[Category: Atp-binding]]
[[Category: Coiled-coil]]
[[Category: Cytoplasm]]
[[Category: Homodimer]]
[[Category: Ligase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Nucleotide-binding]]
[[Category: Protein biosynthesis]]
[[Category: Rsgi]]

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