2yr1: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='2yr1' size='340' side='right'caption='[[2yr1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2yr1' size='340' side='right'caption='[[2yr1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2yr1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YR1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YR1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2yr1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YR1 FirstGlance]. <br>
</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yr1 OCA], [http://pdbe.org/2yr1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yr1 RCSB], [http://www.ebi.ac.uk/pdbsum/2yr1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yr1 ProSAT], [http://www.topsan.org/Proteins/RSGI/2yr1 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yr1 OCA], [https://pdbe.org/2yr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yr1 RCSB], [https://www.ebi.ac.uk/pdbsum/2yr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yr1 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yr1 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AROD_GEOKA AROD_GEOKA]] Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.[HAMAP-Rule:MF_00214]  
[https://www.uniprot.org/uniprot/AROD_GEOKA AROD_GEOKA] Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.[HAMAP-Rule:MF_00214]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 24: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 3-dehydroquinate dehydratase]]
[[Category: Geobacillus kaustophilus HTA426]]
[[Category: Geoka]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bessho, Y]]
[[Category: Bessho Y]]
[[Category: Chen, L]]
[[Category: Chen L]]
[[Category: Chrzas, J]]
[[Category: Chrzas J]]
[[Category: Fu, Z Q]]
[[Category: Fu ZQ]]
[[Category: Kagawa, W]]
[[Category: Kagawa W]]
[[Category: Kurumizaka, H]]
[[Category: Kurumizaka H]]
[[Category: Structural genomic]]
[[Category: Wang BC]]
[[Category: Wang, B C]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S]]
[[Category: 3-dehydroquinase]]
[[Category: Amino acid biosynthesis]]
[[Category: Lyase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Rsgi]]

Latest revision as of 12:04, 25 October 2023

Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426

Structural highlights

2yr1 is a 2 chain structure with sequence from Geobacillus kaustophilus HTA426. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

AROD_GEOKA Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.[HAMAP-Rule:MF_00214]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yr1, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA