7n38: Difference between revisions
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==Crystal structure of 5-site deamidated variant of human gamma(S)-crystallin== | ==Crystal structure of 5-site deamidated variant of human gamma(S)-crystallin== | ||
<StructureSection load='7n38' size='340' side='right'caption='[[7n38]]' scene=''> | <StructureSection load='7n38' size='340' side='right'caption='[[7n38]], [[Resolution|resolution]] 1.22Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7N38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7N38 FirstGlance]. <br> | <table><tr><td colspan='2'>[[7n38]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7N38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7N38 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7n38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7n38 OCA], [https://pdbe.org/7n38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7n38 RCSB], [https://www.ebi.ac.uk/pdbsum/7n38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7n38 ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.22Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7n38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7n38 OCA], [https://pdbe.org/7n38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7n38 RCSB], [https://www.ebi.ac.uk/pdbsum/7n38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7n38 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Disease == | |||
[https://www.uniprot.org/uniprot/CRYGS_HUMAN CRYGS_HUMAN] Early-onset lamellar cataract;Early-onset sutural cataract. The disease is caused by mutations affecting the gene represented in this entry. | |||
== Function == | |||
[https://www.uniprot.org/uniprot/CRYGS_HUMAN CRYGS_HUMAN] Crystallins are the dominant structural components of the vertebrate eye lens. | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Cataract, a clouding of the eye lens from protein precipitation, affects millions of people every year. The lens proteins, the crystallins, show extensive post-translational modifications (PTMs) in cataractous lenses. The most common PTMs, deamidation and oxidation, promote crystallin aggregation; however, it is not clear precisely how these PTMs contribute to crystallin insolubilization. Here, we report six crystal structures of the lens protein gammaS-crystallin (gammaS): one of the wild-type and five of deamidated gammaS variants, from three to nine deamidation sites, after sample aging. The deamidation mutations do not change the overall fold of gammaS; however, increasing deamidation leads to accelerated disulfide-bond formation. Addition of deamidated sites progressively destabilized protein structure, and the deamidated variants display an increased propensity for aggregation. These results suggest that the deamidated variants are useful as models for accelerated aging; the structural changes observed provide support for redox activity of gammaS-crystallin in the lens. | |||
Deamidation of the human eye lens protein gammaS-crystallin accelerates oxidative aging.,Norton-Baker B, Mehrabi P, Kwok AO, Roskamp KW, Rocha MA, Sprague-Piercy MA, von Stetten D, Miller RJD, Martin RW Structure. 2022 May 5;30(5):763-776.e4. doi: 10.1016/j.str.2022.03.002. Epub 2022, Mar 25. PMID:35338852<ref>PMID:35338852</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 7n38" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Crystallin 3D structures|Crystallin 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Martin RW]] | [[Category: Martin RW]] | ||
[[Category: Mehrabi P]] | [[Category: Mehrabi P]] | ||
[[Category: Norton-Baker B]] | [[Category: Norton-Baker B]] | ||