1njg: Difference between revisions

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[[Image:1njg.gif|left|200px]]
[[Image:1njg.gif|left|200px]]


{{Structure
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The line below this paragraph, containing "STRUCTURE_1njg", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span>
or leave the SCENE parameter empty for the default display.
|GENE= DnaX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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|DOMAIN=
{{STRUCTURE_1njg| PDB=1njg  | SCENE= }}  
|RELATEDENTRY=[[1njf|1NJF]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1njg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1njg OCA], [http://www.ebi.ac.uk/pdbsum/1njg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1njg RCSB]</span>
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'''Nucleotide-free form of an Isolated E. coli Clamp Loader Gamma Subunit'''
'''Nucleotide-free form of an Isolated E. coli Clamp Loader Gamma Subunit'''
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[[Category: Podobnik, M.]]
[[Category: Podobnik, M.]]
[[Category: Weitze, T F.]]
[[Category: Weitze, T F.]]
[[Category: aaa+ atpase domain]]
[[Category: Aaa+ atpase domain]]
[[Category: rossman-like fold]]
[[Category: Rossman-like fold]]
[[Category: sensor 1]]
[[Category: Sensor 1]]
[[Category: sensor 2]]
[[Category: Sensor 2]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:31:15 2008''

Revision as of 02:36, 3 May 2008

File:1njg.gif

Template:STRUCTURE 1njg

Nucleotide-free form of an Isolated E. coli Clamp Loader Gamma Subunit


OverviewOverview

Sliding clamps are loaded onto DNA by ATP-driven clamp loader complexes. The structure of the E. coli clamp loader in a nucleotide-free state has been determined previously. We now report crystal structures of a truncated form of the isolated gamma-ATPase subunit, gamma(1-243), of the E. coli clamp loader, in nucleotide-free and bound forms. The gamma subunit adopts a defined conformation when empty, in which the nucleotide binding site is blocked. The binding of either ATPgammaS or ADP, which are shown to bind with equal affinity to gamma(1-243), induces a change in the relative orientation of the two domains such that nucleotides can be accommodated. This change would break one of the gamma:gamma interfaces seen in the empty clamp loader complex, and may represent one step in the activation process.

About this StructureAbout this Structure

1NJG is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

ReferenceReference

Nucleotide-induced conformational changes in an isolated Escherichia coli DNA polymerase III clamp loader subunit., Podobnik M, Weitze TF, O'Donnell M, Kuriyan J, Structure. 2003 Mar;11(3):253-63. PMID:12623013 Page seeded by OCA on Sat May 3 02:36:21 2008

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