6dvx: Difference between revisions

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 ==Citrobacter freundii tyrosine phenol-lyase F448A mutant complexed with L-phenylalanine==
-<StructureSection load='6dvx' size='340' side='right' caption='[[6dvx]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
+<StructureSection load='6dvx' size='340' side='right'caption='[[6dvx]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6dvx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_freundii"_braak_1928 "bacterium freundii" braak 1928]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DVX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DVX FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6dvx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_freundii Citrobacter freundii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DVX FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=P33:3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL'>P33</scene>, <scene name='pdbligand=P70:(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-phenylalanine'>P70</scene>, <scene name='pdbligand=P71:(2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-phenylpropanoic+acid'>P71</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6dur|6dur]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=P33:3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL'>P33</scene>, <scene name='pdbligand=P70:(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-phenylalanine'>P70</scene>, <scene name='pdbligand=P71:(2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-phenylpropanoic+acid'>P71</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tpl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=546 "Bacterium freundii" Braak 1928])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dvx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dvx OCA], [https://pdbe.org/6dvx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dvx RCSB], [https://www.ebi.ac.uk/pdbsum/6dvx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dvx ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tyrosine_phenol-lyase Tyrosine phenol-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.99.2 4.1.99.2] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dvx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dvx OCA], [http://pdbe.org/6dvx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dvx RCSB], [http://www.ebi.ac.uk/pdbsum/6dvx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dvx ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/TPL_CITFR TPL_CITFR]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 19: @@
 </div>
 <div class="pdbe-citations 6dvx" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Tyrosinase 3D structures|Tyrosinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bacterium freundii braak 1928]]
+[[Category: Citrobacter freundii]]
-[[Category: Tyrosine phenol-lyase]]
+[[Category: Large Structures]]
-[[Category: Phillips, R S]]
+[[Category: Phillips RS]]
-[[Category: Aminotransferase fold]]
-[[Category: Lyase]]
-[[Category: Pyridoxal-5'-phosphate]]