5l5k: Difference between revisions

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==Plexin A4 full extracellular region, domains 1 to 10, data to 7.5 angstrom, spacegroup P4(1)==
==Plexin A4 full extracellular region, domains 1 to 10, data to 7.5 angstrom, spacegroup P4(1)==
<StructureSection load='5l5k' size='340' side='right' caption='[[5l5k]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
<StructureSection load='5l5k' size='340' side='right'caption='[[5l5k]], [[Resolution|resolution]] 7.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5l5k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L5K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5L5K FirstGlance]. <br>
<table><tr><td colspan='2'>[[5l5k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L5K FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Plxna4, Kiaa1550 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 7.501&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5l5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l5k OCA], [http://pdbe.org/5l5k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5l5k RCSB], [http://www.ebi.ac.uk/pdbsum/5l5k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5l5k ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l5k OCA], [https://pdbe.org/5l5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l5k RCSB], [https://www.ebi.ac.uk/pdbsum/5l5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l5k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PLXA4_MOUSE PLXA4_MOUSE]] Coreceptor for SEMA3A. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for specific semaphorins, and its cytoplasmic domain is required for the activation of down-stream signaling events in the cytoplasm.<ref>PMID:12591607</ref> <ref>PMID:18262512</ref>
[https://www.uniprot.org/uniprot/PLXA4_MOUSE PLXA4_MOUSE] Coreceptor for SEMA3A. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for specific semaphorins, and its cytoplasmic domain is required for the activation of down-stream signaling events in the cytoplasm.<ref>PMID:12591607</ref> <ref>PMID:18262512</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Plexin|Plexin]]
*[[Plexin 3D structures|Plexin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lk3 transgenic mice]]
[[Category: Large Structures]]
[[Category: Coles, C H]]
[[Category: Mus musculus]]
[[Category: Gilbert, R J.C]]
[[Category: Coles CH]]
[[Category: Janssen, B J.C]]
[[Category: Gilbert RJC]]
[[Category: Jones, E Y]]
[[Category: Janssen BJC]]
[[Category: Kaufmann, R]]
[[Category: Jones EY]]
[[Category: Kong, Y]]
[[Category: Kaufmann R]]
[[Category: Malinauskas, T]]
[[Category: Kong Y]]
[[Category: Ni, T]]
[[Category: Malinauskas T]]
[[Category: Padilla-Parra, S]]
[[Category: Ni T]]
[[Category: Pasterkamp, R J]]
[[Category: Padilla-Parra S]]
[[Category: Vangoor, V R]]
[[Category: Pasterkamp RJ]]
[[Category: Axon guidance]]
[[Category: Vangoor VR]]
[[Category: Receptor]]
[[Category: Signaling]]
[[Category: Signaling protein]]

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