3ao5: Difference between revisions

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<StructureSection load='3ao5' size='340' side='right'caption='[[3ao5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3ao5' size='340' side='right'caption='[[3ao5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ao5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/9hiv1 9hiv1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AO5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ao5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AO5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BBY:5-(7-BROMO-1,3-BENZODIOXOL-5-YL)-1-METHYL-1H-PYRAZOL-3-AMINE'>BBY</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3l3u|3l3u]], [[1bl3|1bl3]], [[3ovn|3ovn]], [[3ao1|3ao1]], [[3ao2|3ao2]], [[3ao3|3ao3]], [[3ao4|3ao4]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BBY:5-(7-BROMO-1,3-BENZODIOXOL-5-YL)-1-METHYL-1H-PYRAZOL-3-AMINE'>BBY</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">POL ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 9HIV1])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ao5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ao5 OCA], [https://pdbe.org/3ao5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ao5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ao5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ao5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ao5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ao5 OCA], [https://pdbe.org/3ao5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ao5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ao5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ao5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q72498_9HIV1 Q72498_9HIV1]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human immunodeficiency virus 1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chalmers, D K]]
[[Category: Chalmers DK]]
[[Category: Headey, S J]]
[[Category: Headey SJ]]
[[Category: Parker, M W]]
[[Category: Parker MW]]
[[Category: Scanlon, M J]]
[[Category: Scanlon MJ]]
[[Category: Wielens, J]]
[[Category: Wielens J]]
[[Category: Aid]]
[[Category: Dna binding]]
[[Category: Dna integration]]
[[Category: Endonuclease]]
[[Category: Fragment binding]]
[[Category: Integrase]]
[[Category: Polynucleotidyl transferase]]
[[Category: Rnaseh]]
[[Category: Viral protein]]
[[Category: Viral protein-transferase inhibitor complex]]

Revision as of 18:50, 4 October 2023

Fragment-based approach to the design of ligands targeting a novel site on HIV-1 integraseFragment-based approach to the design of ligands targeting a novel site on HIV-1 integrase

Structural highlights

3ao5 is a 2 chain structure with sequence from Human immunodeficiency virus 1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:, , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q72498_9HIV1

3ao5, resolution 1.80Å

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OCA
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