5un0: Difference between revisions
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<StructureSection load='5un0' size='340' side='right'caption='[[5un0]], [[Resolution|resolution]] 3.00Å' scene=''> | <StructureSection load='5un0' size='340' side='right'caption='[[5un0]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5un0]] is a 3 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5un0]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UN0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UN0 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5un0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5un0 OCA], [https://pdbe.org/5un0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5un0 RCSB], [https://www.ebi.ac.uk/pdbsum/5un0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5un0 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/O33260_MYCTU O33260_MYCTU] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Bai | [[Category: Mycobacterium tuberculosis]] | ||
[[Category: Darwin | [[Category: Bai L]] | ||
[[Category: Hu | [[Category: Darwin KH]] | ||
[[Category: Jastrab | [[Category: Hu K]] | ||
[[Category: Li | [[Category: Jastrab JB]] | ||
[[Category: Yu | [[Category: Li H]] | ||
[[Category: Yu H]] | |||
Latest revision as of 16:30, 4 October 2023
Crystal Structure of Mycobacterium Tuberculosis Proteasome-assembly chaperone homologue Rv2125Crystal Structure of Mycobacterium Tuberculosis Proteasome-assembly chaperone homologue Rv2125
Structural highlights
FunctionPublication Abstract from PubMedA previous bioinformatics analysis identified the Mycobacterium tuberculosis (M. tuberculosis) proteins Rv2125 and Rv2714 as orthologs of the eukaryotic proteasome assembly chaperone 2 (PAC2). We set out to investigate whether Rv2125 or Rv2714 could function in proteasome assembly. We solved the crystal structure of Rv2125 at 3.0 A resolution, which showed an overall fold similar to that of the PAC2 family proteins that include the archaeal PbaB and the yeast Pba1. However, Rv2125 and Rv2714 formed trimers, whereas PbaB forms tetramers and Pba1 dimerizes with Pba2. We also found that purified Rv2125 and Rv2714 could not bind to M. tuberculosis 20S core particles. Finally, proteomic analysis showed that the levels of known proteasome component and substrate proteins were not affected by disruption of Rv2125 in M. tuberculosis Our work suggests that Rv2125 does not participate in bacterial proteasome assembly or function.Importance Although many bacteria do not encode proteasomes, M. tuberculosis not only uses proteasomes, it has also evolved a post-translational modification system called pupylation to deliver proteins to the proteasome. Proteasomes are essential for M. tuberculosis to cause lethal infections in animals, thus determining how proteasomes are assembled may help identify new ways to combat tuberculosis. We solved the structure of a predicted proteasome assembly factor, Rv2125, and isolated a genetic mutant of Rv2125 in M. tuberculosis Our structural, biochemical, and genetic studies indicate that Rv2125 and Rv2714 do not function as proteasome assembly chaperones and are unlikely to have roles in proteasome biology in mycobacteria. Structural analysis of Mycobacterium tuberculosis homologues of the eukaryotic proteasome assembly chaperone 2 (PAC2).,Bai L, Jastrab JB, Isasa M, Hu K, Yu H, Gygi SP, Darwin KH, Li H J Bacteriol. 2017 Feb 13. pii: JB.00846-16. doi: 10.1128/JB.00846-16. PMID:28193903[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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