5u5b: Difference between revisions

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<StructureSection load='5u5b' size='340' side='right'caption='[[5u5b]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='5u5b' size='340' side='right'caption='[[5u5b]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5u5b]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U5B FirstGlance]. <br>
<table><tr><td colspan='2'>[[5u5b]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U5B FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=7WJ:(2S)-2-AMINO-4-[([1~2~,2~2~ 2~6~,3~2~-TERPYRIDINE]-2~4~-CARBONYL)AMINO]BUTANOIC+ACID'>7WJ</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7WJ:(2S)-2-AMINO-4-[([1~2~,2~2~ 2~6~,3~2~-TERPYRIDINE]-2~4~-CARBONYL)AMINO]BUTANOIC+ACID'>7WJ</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5u59|5u59]], [[5u5a|5u5a]], [[5u5c|5u5c]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5b OCA], [https://pdbe.org/5u5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u5b RCSB], [https://www.ebi.ac.uk/pdbsum/5u5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5b ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5b OCA], [http://pdbe.org/5u5b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u5b RCSB], [http://www.ebi.ac.uk/pdbsum/5u5b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5b ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Horne, W S]]
[[Category: Synthetic construct]]
[[Category: Murnin, M J]]
[[Category: Horne WS]]
[[Category: Tavenor, N A]]
[[Category: Murnin MJ]]
[[Category: De novo protein]]
[[Category: Tavenor NA]]
[[Category: Designed peptide]]
[[Category: Metal coordination framework]]
[[Category: Supramolecular assembly]]
[[Category: Synthetic]]

Latest revision as of 16:21, 4 October 2023

Coiled Coil Peptide Metal Coordination Framework: Trimer FoldCoiled Coil Peptide Metal Coordination Framework: Trimer Fold

Structural highlights

5u5b is a 3 chain structure with sequence from Synthetic construct. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Metal coordination and peptide-directed self-assembly are two proven methods for creating defined supramolecular architectures. Here, we report a new class of crystalline materials based on coiled-coil peptides bearing unnatural metal-chelating terpyridine moieties. High-resolution structural characterization of lattices formed in the presence of Cu2+ reveals a general assembly mechanism. Subtle sequence variation in the modular synthetic ligand dictates assembly morphology.

Supramolecular Metal-Coordination Polymers, Nets, and Frameworks from Synthetic Coiled-Coil Peptides.,Tavenor NA, Murnin MJ, Horne WS J Am Chem Soc. 2017 Feb 15;139(6):2212-2215. doi: 10.1021/jacs.7b00651. Epub 2017, Feb 7. PMID:28161945[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. ↑ Tavenor NA, Murnin MJ, Horne WS. Supramolecular Metal-Coordination Polymers, Nets, and Frameworks from Synthetic Coiled-Coil Peptides. J Am Chem Soc. 2017 Feb 15;139(6):2212-2215. doi: 10.1021/jacs.7b00651. Epub 2017, Feb 7. PMID:28161945 doi:http://dx.doi.org/10.1021/jacs.7b00651

5u5b, resolution 2.40Å

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