3ist: Difference between revisions

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<StructureSection load='3ist' size='340' side='right'caption='[[3ist]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='3ist' size='340' side='right'caption='[[3ist]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ist]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lismo Lismo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IST OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IST FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ist]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IST OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IST FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3hfr|3hfr]], [[3isv|3isv]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lmo1237, murI, racE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=169963 LISMO])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glutamate_racemase Glutamate racemase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.3 5.1.1.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ist FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ist OCA], [https://pdbe.org/3ist PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ist RCSB], [https://www.ebi.ac.uk/pdbsum/3ist PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ist ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ist FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ist OCA], [https://pdbe.org/3ist PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ist RCSB], [https://www.ebi.ac.uk/pdbsum/3ist PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ist ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/MURI_LISMO MURI_LISMO]] Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).  
[https://www.uniprot.org/uniprot/MURI_LISMO MURI_LISMO] Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Glutamate racemase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lismo]]
[[Category: Listeria monocytogenes EGD-e]]
[[Category: Anderson, W F]]
[[Category: Anderson WF]]
[[Category: Bujnicki, J M]]
[[Category: Bujnicki JM]]
[[Category: Structural genomic]]
[[Category: Chruszcz M]]
[[Category: Chruszcz, M]]
[[Category: Majorek KA]]
[[Category: Majorek, K A]]
[[Category: Minor W]]
[[Category: Minor, W]]
[[Category: Onopriyenko O]]
[[Category: Onopriyenko, O]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Skarina T]]
[[Category: Skarina, T]]
[[Category: Stam J]]
[[Category: Stam, J]]
[[Category: Cell shape]]
[[Category: Cell wall biogenesis/degradation]]
[[Category: Csgid]]
[[Category: Isomerase]]
[[Category: Peptidoglycan synthesis]]

Revision as of 10:57, 6 September 2023

Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acidCrystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid

Structural highlights

3ist is a 2 chain structure with sequence from Listeria monocytogenes EGD-e. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.65Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MURI_LISMO Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ist, resolution 1.65Å

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OCA