3doj: Difference between revisions

No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='3doj' size='340' side='right'caption='[[3doj]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3doj' size='340' side='right'caption='[[3doj]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3doj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DOJ FirstGlance]. <br>
<table><tr><td colspan='2'>[[3doj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DOJ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.101&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At3g25530 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glyoxylate_reductase_(NADP(+)) Glyoxylate reductase (NADP(+))], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.79 1.1.1.79] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3doj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3doj OCA], [https://pdbe.org/3doj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3doj RCSB], [https://www.ebi.ac.uk/pdbsum/3doj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3doj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3doj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3doj OCA], [https://pdbe.org/3doj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3doj RCSB], [https://www.ebi.ac.uk/pdbsum/3doj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3doj ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/GLYR1_ARATH GLYR1_ARATH]] Catalyzes the NADPH-dependent reduction of glyoxylate to glycolate as well as succinic semialdehyde (SSA) to gamma-hydroxybutyrate in vitro. May function in redox homeostasis and play a role in oxidative stress tolerance by detoxifying glyoxylate and SSA generated in glycolate metabolism and GABA metabolism, respectively.<ref>PMID:12882961</ref> <ref>PMID:22223895</ref> <ref>PMID:22309191</ref>
[https://www.uniprot.org/uniprot/GLYR1_ARATH GLYR1_ARATH] Catalyzes the NADPH-dependent reduction of glyoxylate to glycolate as well as succinic semialdehyde (SSA) to gamma-hydroxybutyrate in vitro. May function in redox homeostasis and play a role in oxidative stress tolerance by detoxifying glyoxylate and SSA generated in glycolate metabolism and GABA metabolism, respectively.<ref>PMID:12882961</ref> <ref>PMID:22223895</ref> <ref>PMID:22309191</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 25: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Jorgensen, R]]
[[Category: Jorgensen R]]
[[Category: 4-hydroxybutyrate dehydrogenase]]
[[Category: Gamma-hydroxybutyrate dehydrogenase]]
[[Category: Oxidoreductase]]
[[Category: Succinic semialdehyde reductase]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA