1slh: Difference between revisions

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@@ Line 3: / Line 3: @@
 <StructureSection load='1slh' size='340' side='right'caption='[[1slh]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1slh]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SLH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1SLH FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1slh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SLH FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUD:DEOXYURIDINE-5-DIPHOSPHATE'>DUD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1sm8|1sm8]], [[1smc|1smc]], [[1sjn|1sjn]], [[1six|1six]], [[1mq7|1mq7]]</div></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUD:DEOXYURIDINE-5-DIPHOSPHATE'>DUD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DUT, RV2697C, MT2771, MTCY05A6.18C, MB2716C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1slh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1slh OCA], [https://pdbe.org/1slh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1slh RCSB], [https://www.ebi.ac.uk/pdbsum/1slh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1slh ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1slh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1slh OCA], [http://pdbe.org/1slh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1slh RCSB], [http://www.ebi.ac.uk/pdbsum/1slh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1slh ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/DUT_MYCTU DUT_MYCTU]] This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.[HAMAP-Rule:MF_00116]
+[https://www.uniprot.org/uniprot/DUT_MYCTU DUT_MYCTU] This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.[HAMAP-Rule:MF_00116]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 39: / Line 37: @@
 </StructureSection>
 [[Category: Large Structures]]
-[[Category: DUTP diphosphatase]]
+[[Category: Mycobacterium tuberculosis]]
-[[Category: Cascio, D]]
+[[Category: Cascio D]]
-[[Category: Chan, S]]
+[[Category: Chan S]]
-[[Category: Cho, U S]]
+[[Category: Cho US]]
-[[Category: Eisenberg, D]]
+[[Category: Eisenberg D]]
-[[Category: Kim, C Y]]
+[[Category: Kim C-Y]]
-[[Category: Kim, M Y]]
+[[Category: Kim M-Y]]
-[[Category: Krupka, H]]
+[[Category: Krupka H]]
-[[Category: Lekin, T]]
+[[Category: Lekin T]]
-[[Category: Naranjo, C M]]
+[[Category: Naranjo CM]]
-[[Category: Park, M S]]
+[[Category: Park MS]]
-[[Category: Pashkov, I]]
+[[Category: Pashkov I]]
-[[Category: Perry, J L]]
+[[Category: Perry JL]]
-[[Category: Rogers, Y C]]
+[[Category: Rogers YC]]
-[[Category: Sawaya, M R]]
+[[Category: Sawaya MR]]
-[[Category: Segelke, B]]
+[[Category: Segelke B]]
-[[Category: So, M]]
+[[Category: So M]]
-[[Category: Structural genomic]]
+[[Category: Terwilliger TC]]
-[[Category: Terwilliger, T C]]
+[[Category: Waldo GS]]
-[[Category: Waldo, G S]]
+[[Category: Yeates TO]]
-[[Category: Yeates, T O]]
-[[Category: Hydrolase]]
-[[Category: Jelly-roll]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Tbsgc]]