1kx5: Difference between revisions

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<StructureSection load='1kx5' size='340' side='right'caption='[[1kx5]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
<StructureSection load='1kx5' size='340' side='right'caption='[[1kx5]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1kx5]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/ ] and [https://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KX5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1kx5]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KX5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1aoi|1aoi]], [[1kx3|1kx3]], [[1kx4|1kx4]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kx5 OCA], [https://pdbe.org/1kx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kx5 RCSB], [https://www.ebi.ac.uk/pdbsum/1kx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kx5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kx5 OCA], [https://pdbe.org/1kx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kx5 RCSB], [https://www.ebi.ac.uk/pdbsum/1kx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kx5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/H2B11_XENLA H2B11_XENLA]] Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. [[https://www.uniprot.org/uniprot/H32_BOVIN H32_BOVIN]] Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. [[https://www.uniprot.org/uniprot/H2A1_XENLA H2A1_XENLA]] Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.  
[https://www.uniprot.org/uniprot/H32_XENLA H32_XENLA] Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: African clawed frog]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Davey, C A]]
[[Category: Xenopus laevis]]
[[Category: Luger, K]]
[[Category: Davey CA]]
[[Category: Maeder, A W]]
[[Category: Luger K]]
[[Category: Richmond, T J]]
[[Category: Maeder AW]]
[[Category: Sargent, D F]]
[[Category: Richmond TJ]]
[[Category: Chromatin]]
[[Category: Sargent DF]]
[[Category: Dna bending]]
[[Category: Dna curvature]]
[[Category: Dna solvation]]
[[Category: Dna-cation binding]]
[[Category: Dna-metal binding]]
[[Category: Histone]]
[[Category: Nucleoprotein]]
[[Category: Nucleosome]]
[[Category: Nucleosome core]]
[[Category: Protein-dna complex]]
[[Category: Protein-dna interaction]]
[[Category: Structural protein-dna complex]]
[[Category: Supercoiled dna]]

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