5dyf: Difference between revisions

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<StructureSection load='5dyf' size='340' side='right'caption='[[5dyf]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='5dyf' size='340' side='right'caption='[[5dyf]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5dyf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neimb Neimb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DYF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DYF FirstGlance]. <br>
<table><tr><td colspan='2'>[[5dyf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DYF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DYF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5HR:[(1R)-1-AMINO-2-(BENZYLAMINO)ETHYL]PHOSPHONIC+ACID'>5HR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.854&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5HR:[(1R)-1-AMINO-2-(BENZYLAMINO)ETHYL]PHOSPHONIC+ACID'>5HR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4qir|4qir]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dyf OCA], [https://pdbe.org/5dyf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dyf RCSB], [https://www.ebi.ac.uk/pdbsum/5dyf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dyf ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pepN, NMB1416 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Membrane_alanyl_aminopeptidase Membrane alanyl aminopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.11.2 3.4.11.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dyf OCA], [http://pdbe.org/5dyf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dyf RCSB], [http://www.ebi.ac.uk/pdbsum/5dyf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dyf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9JYV4_NEIMB Q9JYV4_NEIMB]


==See Also==
==See Also==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Membrane alanyl aminopeptidase]]
[[Category: Neisseria meningitidis MC58]]
[[Category: Neimb]]
[[Category: Berlicki L]]
[[Category: Berlicki, L]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A]]
[[Category: Mucha A]]
[[Category: Structural genomic]]
[[Category: Nocek B]]
[[Category: Mucha, A]]
[[Category: Vassiliou S]]
[[Category: Nocek, B]]
[[Category: Vassiliou, S]]
[[Category: 2-diaminoethylphosphonic acid]]
[[Category: Aminopeptidasen]]
[[Category: Hydrolase-hydrolase inhibitor complex]]
[[Category: Inhibitor complex]]
[[Category: Mcsg]]
[[Category: N-benzyl-1]]
[[Category: Psi-biology]]

Latest revision as of 01:05, 29 June 2023

The crystal structure of Aminopeptidase N in complex with N-benzyl-1,2-diaminoethylphosphonic acidThe crystal structure of Aminopeptidase N in complex with N-benzyl-1,2-diaminoethylphosphonic acid

Structural highlights

5dyf is a 1 chain structure with sequence from Neisseria meningitidis MC58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.854Å
Ligands:, , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9JYV4_NEIMB

See Also

5dyf, resolution 1.85Å

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