1stm: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1stm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Panicum_mosaic_satellite_virus Panicum mosaic satellite virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1STM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1STM FirstGlance]. <br> | <table><tr><td colspan='2'>[[1stm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Panicum_mosaic_satellite_virus Panicum mosaic satellite virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1STM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1STM FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1stm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1stm OCA], [https://pdbe.org/1stm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1stm RCSB], [https://www.ebi.ac.uk/pdbsum/1stm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1stm ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1stm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1stm OCA], [https://pdbe.org/1stm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1stm RCSB], [https://www.ebi.ac.uk/pdbsum/1stm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1stm ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/COAT_SPMV COAT_SPMV] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Panicum mosaic satellite virus]] | [[Category: Panicum mosaic satellite virus]] | ||
[[Category: Ban | [[Category: Ban N]] | ||
[[Category: McPherson | [[Category: McPherson A]] | ||
Revision as of 00:36, 29 June 2023
SATELLITE PANICUM MOSAIC VIRUSSATELLITE PANICUM MOSAIC VIRUS
Structural highlights
FunctionPublication Abstract from PubMedThe crystal structure of satellite panicum mosaic virus (SPMV) has been solved by multiple isomorphous replacement and molecular replacement and refined at 1.9 A resolution. SPMV, a T = 1 icosahedral virus, is the smallest virus structure determined. The coat protein is an eight-stranded 'jelly roll' beta-barrel with an amino-terminal strand that extends into the interior of the virus, presumably interacting with the RNA. Regions of electron density on the interior of the protein capsid may be RNA, although it is not possible to construct any detailed model of the nucleic acid. Basic amino acid residues in contact with the nucleic acid show a considerable degree of disorder. The carboxy-terminal strand of the virus coat protein interacts with adjacent subunits, forming an additional beta-strand. The structure of satellite panicum mosaic virus at 1.9 A resolution.,Ban N, McPherson A Nat Struct Biol. 1995 Oct;2(10):882-90. PMID:7552713[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences |
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