5d6m: Difference between revisions

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OCA

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 <StructureSection load='5d6m' size='340' side='right'caption='[[5d6m]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5d6m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D6M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D6M FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5d6m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5D6M FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CCP1, CCP, CPO, YKR066C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5d6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d6m OCA], [https://pdbe.org/5d6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5d6m RCSB], [https://www.ebi.ac.uk/pdbsum/5d6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5d6m ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d6m OCA], [http://pdbe.org/5d6m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d6m RCSB], [http://www.ebi.ac.uk/pdbsum/5d6m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5d6m ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CCPR_YEAST CCPR_YEAST]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
+[https://www.uniprot.org/uniprot/CCPR_YEAST CCPR_YEAST] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
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 __TOC__
 </StructureSection>
-[[Category: Baker's yeast]]
-[[Category: Cytochrome-c peroxidase]]
 [[Category: Large Structures]]
-[[Category: Gao, Y G]]
+[[Category: Saccharomyces cerevisiae S288C]]
-[[Category: Hosseinzadeh, P]]
+[[Category: Gao Y-G]]
-[[Category: Lu, Y]]
+[[Category: Hosseinzadeh P]]
-[[Category: Robinson, H]]
+[[Category: Lu Y]]
-[[Category: Glutamate]]
+[[Category: Robinson H]]
-[[Category: Mn oxidation]]
-[[Category: Oxidoreductase]]
-[[Category: Peroxidase fold]]