5bnd: Difference between revisions

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==Crystal structure of the C-terminal domain of TagH==
==Crystal structure of the C-terminal domain of TagH==
<StructureSection load='5bnd' size='340' side='right' caption='[[5bnd]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
<StructureSection load='5bnd' size='340' side='right'caption='[[5bnd]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5bnd]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Staeq Staeq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BND OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BND FirstGlance]. <br>
<table><tr><td colspan='2'>[[5bnd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_epidermidis_RP62A Staphylococcus epidermidis RP62A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BND FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SERP1409 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176279 STAEQ])</td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bnd OCA], [https://pdbe.org/5bnd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bnd RCSB], [https://www.ebi.ac.uk/pdbsum/5bnd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bnd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bnd OCA], [http://pdbe.org/5bnd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bnd RCSB], [http://www.ebi.ac.uk/pdbsum/5bnd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5bnd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5HN63_STAEQ Q5HN63_STAEQ]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Staeq]]
[[Category: Large Structures]]
[[Category: Chen, S C]]
[[Category: Staphylococcus epidermidis RP62A]]
[[Category: Chen, Y]]
[[Category: Chen SC]]
[[Category: Transport protein]]
[[Category: Chen Y]]
[[Category: Transporter]]

Revision as of 09:00, 7 June 2023

Crystal structure of the C-terminal domain of TagHCrystal structure of the C-terminal domain of TagH

Structural highlights

5bnd is a 3 chain structure with sequence from Staphylococcus epidermidis RP62A. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5HN63_STAEQ

Publication Abstract from PubMed

The negatively charged bacterial polysaccharides - wall teichoic acids (WTAs) are synthesized intracellularly and exported by a two-component transporter, TagGH, comprising a transmembrane subunit TagG and an ATPase subunit TagH. We determined the crystal structure of the C-terminal domain of TagH (TagH-C) to investigate its function. The structure shows an N-terminal SH3-like subdomain wrapped by a C-terminal subdomain with an anti-parallel beta-sheet and an outer shell of alpha-helices. A stretch of positively charged surface across the subdomain interface is flanked by two negatively charged regions, suggesting a potential binding site for negatively charged polymers, such as WTAs or acidic peptide chains. This article is protected by copyright. All rights reserved.

SH3-Like Motif-Containing C-terminal Domain of Staphylococcal Teichoic Acid Transporter Suggests Possible Function.,Ko TP, Tseng ST, Lai SJ, Chen SC, Guan HH, Yang CS, Chen CJ, Chen Y Proteins. 2016 May 23. doi: 10.1002/prot.25074. PMID:27213893[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Ko TP, Tseng ST, Lai SJ, Chen SC, Guan HH, Yang CS, Chen CJ, Chen Y. SH3-Like Motif-Containing C-terminal Domain of Staphylococcal Teichoic Acid Transporter Suggests Possible Function. Proteins. 2016 May 23. doi: 10.1002/prot.25074. PMID:27213893 doi:http://dx.doi.org/10.1002/prot.25074

5bnd, resolution 2.68Å

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OCA