5aa7: Difference between revisions
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<StructureSection load='5aa7' size='340' side='right'caption='[[5aa7]], [[Resolution|resolution]] 1.55Å' scene=''> | <StructureSection load='5aa7' size='340' side='right'caption='[[5aa7]], [[Resolution|resolution]] 1.55Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5aa7]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5aa7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Jonesia_denitrificans Jonesia denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AA7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AA7 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5aa7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aa7 OCA], [https://pdbe.org/5aa7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5aa7 RCSB], [https://www.ebi.ac.uk/pdbsum/5aa7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5aa7 ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/C7R4I0_JONDD C7R4I0_JONDD] | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Jonesia denitrificans]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Choudhary | [[Category: Choudhary S]] | ||
[[Category: Dalhus | [[Category: Dalhus B]] | ||
[[Category: Eijsink | [[Category: Eijsink V]] | ||
[[Category: Forsberg | [[Category: Forsberg Z]] | ||
[[Category: Mekasha | [[Category: Mekasha S]] | ||
[[Category: Schmidt-Dannert | [[Category: Schmidt-Dannert C]] | ||
[[Category: Vaaje-Kolstad | [[Category: Vaaje-Kolstad G]] | ||
Revision as of 07:47, 25 May 2023
Structural and functional characterization of a chitin-active 15.5 kDa lytic polysaccharide monooxygenase domain from a modular chitinase from Jonesia denitrificansStructural and functional characterization of a chitin-active 15.5 kDa lytic polysaccharide monooxygenase domain from a modular chitinase from Jonesia denitrificans
Structural highlights
FunctionPublication Abstract from PubMedLytic polysaccharide monooxygenases (LPMOs) boost enzymatic depolymerization of recalcitrant polysaccharides, such as chitin and cellulose. We have studied a chitin-active LPMO domain (JdLPMO10A) that is considerably smaller (15.5 kDa) than all structurally characterized LPMOs so far and that is part of a modular protein containing a GH18 chitinase. The 1.55 A resolution structure revealed deletions of interacting loops that protrude from the core beta-sandwich scaffold in larger LPMO10s. Despite these deletions, the enzyme is active on alpha- and beta-chitin, and the chitin-binding surface previously described for larger LPMOs is fully conserved. JdLPMO10A may represent a minimal scaffold needed to catalyse the powerful LPMO reaction. Structural and functional characterization of a small chitin-active lytic polysaccharide monooxygenase domain of a multi-modular chitinase from Jonesia denitrificans.,Mekasha S, Forsberg Z, Dalhus B, Bacik JP, Choudhary S, Schmidt-Dannert C, Vaaje-Kolstad G, Eijsink VG FEBS Lett. 2016 Jan;590(1):34-42. doi: 10.1002/1873-3468.12025. Epub 2015 Dec 28. PMID:26763108[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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