Hydroxylases 3D structures: Difference between revisions
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**[[2v27]], [[2v28]] – PAH – ''Colwellia psychrerythraea''<br /> | **[[2v27]], [[2v28]] – PAH – ''Colwellia psychrerythraea''<br /> | ||
**[[1ltu]], [[1ltv]] – CvPAH – ''Chromobacterium violaceum''<br /> | **[[1ltu]], [[1ltv]] – CvPAH – ''Chromobacterium violaceum''<br /> | ||
**[[4bpt]] – PAH –'' Legionella pneumophila''<br /> | **[[4bpt]] – PAH – ''Legionella pneumophila''<br /> | ||
**[[1ltz]] - CvPAH + cofactor<br /> | **[[1ltz]] - CvPAH + cofactor<br /> | ||
**[[3tcy]], [[3tk2]] – CvPAH + phenylalanine<br /> | **[[3tcy]], [[3tk2]] – CvPAH + phenylalanine<br /> | ||
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**[[4jpx]] - CvPAH (mutant) + Co + phenylalanine<br /> | **[[4jpx]] - CvPAH (mutant) + Co + phenylalanine<br /> | ||
**[[4jpy]] - CvPAH + Fe + phenylalanine<br /> | **[[4jpy]] - CvPAH + Fe + phenylalanine<br /> | ||
**[[7vgm]] - PAH + Fe – Bacillus cereus<br /> | **[[7vgm]] - PAH + Fe – ''Bacillus cereus''<br /> | ||
*Tyrosine hydroxylase (cofactor tetrahydrobiopterin) | *Tyrosine hydroxylase (cofactor tetrahydrobiopterin) | ||
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**[2toh]], [[1toh]] – rTH catalytic and tetramerization domains 160-498 – rat | **[2toh]], [[1toh]] – rTH catalytic and tetramerization domains 160-498 – rat | ||
**[[2mda]] – rTH regulatory domain 65-159 – NMR<br /> | **[[2mda]] – rTH regulatory domain 65-159 – NMR<br /> | ||
**[[7kqr]], [[7kqs]], [[7kqt]], [[7kqu]] – TH + heme + Tyr derivative – Streptomyces sclerotialus <br /> | **[[7kqr]], [[7kqs]], [[7kqt]], [[7kqu]] – TH + heme + Tyr derivative – ''Streptomyces sclerotialus'' <br /> | ||
*Tryptophan hydroxylase | *Tryptophan hydroxylase | ||
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**[[1k0l]] – PaPHBH (mutant) + FAD <br /> | **[[1k0l]] – PaPHBH (mutant) + FAD <br /> | ||
**[[5tti]], [[6dll]] – PfPHBH + FAD – ''Pseudomonas putida''<br /> | **[[5tti]], [[6dll]] – PfPHBH + FAD – ''Pseudomonas putida''<br /> | ||
**[[2dki]] – CtPHBH + FAD – Comamonas testosteroni<br /> | **[[2dki]] – CtPHBH + FAD – ''Comamonas testosteroni''<br /> | ||
**[[2dkh]] – CtPHBH + FAD + hydroxy-benzoate <br /> | **[[2dkh]] – CtPHBH + FAD + hydroxy-benzoate <br /> | ||
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*Alpha-ketoglutarate-dependent L-arginine hydroxylase | *Alpha-ketoglutarate-dependent L-arginine hydroxylase | ||
**[[6dax]], [[6alm]], [[6aln]], [[6mp8]] – SvAAH + arginine + oxoglutarate + Fe – Streptomyces vinaceus<br /> | **[[6dax]], [[6alm]], [[6aln]], [[6mp8]] – SvAAH + arginine + oxoglutarate + Fe – ''Streptomyces vinaceus''<br /> | ||
**[[6daz]], [[6alo]], [[6alp]], [[6alq]], [[6y12]] – SvAAH + arginine + succinate + Fe <br /> | **[[6daz]], [[6alo]], [[6alp]], [[6alq]], [[6y12]] – SvAAH + arginine + succinate + Fe <br /> | ||
**[[6y0n]] – SvAAH + arginine + AKG + Fe <br /> | **[[6y0n]] – SvAAH + arginine + AKG + Fe <br /> | ||
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*PLP-dependent L-arginine hydroxylase | *PLP-dependent L-arginine hydroxylase | ||
**[[6c9b]] – SwAAH + PLP – Streptomyces wadayamensis<br /> | **[[6c9b]] – SwAAH + PLP – ''Streptomyces wadayamensis''<br /> | ||
**[[5dj1]] – SwAAH + PLP + Mg<br /> | **[[5dj1]] – SwAAH + PLP + Mg<br /> | ||
**[[5dj3]] – SwAAH + PLP-arginine + Mg<br /> | **[[5dj3]] – SwAAH + PLP-arginine + Mg<br /> | ||
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*Leucine hydroxylase | *Leucine hydroxylase | ||
**[[5nch]] – StAAH – Streptomyces <br /> | **[[5nch]] – StAAH – ''Streptomyces'' <br /> | ||
**[[5nci]] – StAAH + leucine derivative + oxoglutarate + Co <br /> | **[[5nci]] – StAAH + leucine derivative + oxoglutarate + Co <br /> | ||
**[[5ncj]] – StAAH + leucine derivative + succinate + Mn <br /> | **[[5ncj]] – StAAH + leucine derivative + succinate + Mn <br /> | ||
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*L-arginine b-hydroxylase or non-heme iron oxygenase | *L-arginine b-hydroxylase or non-heme iron oxygenase | ||
**[[4m23]] – SlORFP – Streptomyces lavendulae<br /> | **[[4m23]] – SlORFP – ''Streptomyces lavendulae''<br /> | ||
**[[4m2i]] – SlORFP + Fe <br /> | **[[4m2i]] – SlORFP + Fe <br /> | ||
**[[4m25]] – SlORFP + Fe + ketoglutarate <br /> | **[[4m25]] – SlORFP + Fe + ketoglutarate <br /> | ||
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**[[4m2f]] – SlORFP + Fe + canavanine<br /> | **[[4m2f]] – SlORFP + Fe + canavanine<br /> | ||
**[[4m2g]], [[4m26]] – SlORFP + Fe + succinate + Arg derivative<br /> | **[[4m2g]], [[4m26]] – SlORFP + Fe + succinate + Arg derivative<br /> | ||
**[[2wbo]] – SvVIOC + Fe + Arg – Streptomyces vinaceus<br /> | **[[2wbo]] – SvVIOC + Fe + Arg – ''Streptomyces vinaceus''<br /> | ||
**[[2wbq]] – SvVIOC + Arg derivative<br /> | **[[2wbq]] – SvVIOC + Arg derivative<br /> | ||
**[[2wbp]] – SvVIOC + Fe + succinate + Arg derivative<br /> | **[[2wbp]] – SvVIOC + Fe + succinate + Arg derivative<br /> | ||
**[[6daw]] – NAPI + Fe + Arg – Streptomyces lusitanus<br /> | **[[6daw]] – NAPI + Fe + Arg – ''Streptomyces lusitanus''<br /> | ||
*Prolyl 4-hydroxylase | *Prolyl 4-hydroxylase | ||
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**[[6evl]] - hPH a2 subunit <br /> | **[[6evl]] - hPH a2 subunit <br /> | ||
**[[6evm]], [[6evn]], [[6evo]], [[6evp]] - hPH a2 subunit + peptide<br /> | **[[6evm]], [[6evn]], [[6evo]], [[6evp]] - hPH a2 subunit + peptide<br /> | ||
**[[3itq]], [[5hv0]] - BaPH – Bacillus anthracis <br /> | **[[3itq]], [[5hv0]] - BaPH – ''Bacillus anthracis'' <br /> | ||
**[[5hv4]] - BaPH + ketoglutarate<br /> | **[[5hv4]] - BaPH + ketoglutarate<br /> | ||
**[[5c5u]] - PcvPH + Mn – Paramecium chlorella virus <br /> | **[[5c5u]] - PcvPH + Mn – Paramecium chlorella virus <br /> | ||
**[[5c5t]] - PcvPH + Mn + Zn <br /> | **[[5c5t]] - PcvPH + Mn + Zn <br /> | ||
**[[4p7x]] - RlPH + Co + pipecolic acid – Rhizobium loti <br /> | **[[4p7x]] - RlPH + Co + pipecolic acid – ''Rhizobium loti'' <br /> | ||
**[[4p7w]] - RlPH + Co + proline<br /> | **[[4p7w]] - RlPH + Co + proline<br /> | ||
**[[6iuq]] - PH + Fe – Phytophthora capsici<br /> | **[[6iuq]] - PH + Fe – ''Phytophthora capsici''<br /> | ||
**[[2v4a]], [[2jij]] - CrPH – Chlamydomonas reinhardtii <br /> | **[[2v4a]], [[2jij]] - CrPH – ''Chlamydomonas reinhardtii'' <br /> | ||
**[[2jig]] - CrPH + Zn + pyridine derivative<br /> | **[[2jig]] - CrPH + Zn + pyridine derivative<br /> | ||
**[[3gze]] - CrPH + Zn + peptide<br /> | **[[3gze]] - CrPH + Zn + peptide<br /> | ||
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*Lysine 4-hydroxylase | *Lysine 4-hydroxylase | ||
**[[6f9p]] – FlL4H + Fe – Flavobacterium <br /> | **[[6f9p]] – FlL4H + Fe – ''Flavobacterium'' <br /> | ||
**[[6exf]] – FlL4H + Fe + lysine <br /> | **[[6exf]] – FlL4H + Fe + lysine <br /> | ||
**[[6euo]] – FlL4H + Fe + succinate derivative<br /> | **[[6euo]] – FlL4H + Fe + succinate derivative<br /> | ||
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*Lysine 3-hydroxylase | *Lysine 3-hydroxylase | ||
**[[6f2e]] – CaL3H – Catenulispora acidiphila <br /> | **[[6f2e]] – CaL3H – ''Catenulispora acidiphila'' <br /> | ||
**[[6f2b]] – CaL3H + Fe + oxoglutarate <br /> | **[[6f2b]] – CaL3H + Fe + oxoglutarate <br /> | ||
**[[6f2a]] – CaL3H + Fe + lysine <br /> | **[[6f2a]] – CaL3H + Fe + lysine <br /> | ||
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**[[6bz5]] - PpSH <br /> | **[[6bz5]] - PpSH <br /> | ||
**[[5evy]] - PpSH + FAD + salicilate <br /> | **[[5evy]] - PpSH + FAD + salicilate <br /> | ||
**[[7c8z]] - SH + Fe2S2 + Fe - Ralstonia <br /> | **[[7c8z]] - SH + Fe2S2 + Fe - ''Ralstonia'' <br /> | ||
*Dopamine b-hydroxylase (cofactor ascorbic acid) | *Dopamine b-hydroxylase (cofactor ascorbic acid) | ||
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*Ectoine hydroxylase | *Ectoine hydroxylase | ||
**[[4mhr]] - SaEH – Sphingopyxis alaskensis <br /> | **[[4mhr]] - SaEH – ''Sphingopyxis alaskensis'' <br /> | ||
**[[4mhu]] - SaEH + Fe <br /> | **[[4mhu]] - SaEH + Fe <br /> | ||
**[[4q5o]] - SaEH + Fe + 5-hydroxyectoine <br /> | **[[4q5o]] - SaEH + Fe + 5-hydroxyectoine <br /> | ||
**[[4nmi]] - VsEH – Virgibacillus salexigens<br /> | **[[4nmi]] - VsEH – ''Virgibacillus salexigens''<br /> | ||
**[[3emr]] - VsEH + Fe <br /> | **[[3emr]] - VsEH + Fe <br /> | ||