4tw6: Difference between revisions

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<StructureSection load='4tw6' size='340' side='right'caption='[[4tw6]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='4tw6' size='340' side='right'caption='[[4tw6]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4tw6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TW6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TW6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4tw6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TW6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=37L:(3-{(1R)-3-(3,4-DIMETHOXYPHENYL)-1-[({(2S)-1-[(2S)-2-(3,4,5-TRIMETHOXYPHENYL)PENT-4-ENOYL]PIPERIDIN-2-YL}CARBONYL)OXY]PROPYL}PHENOXY)ACETIC+ACID'>37L</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=37L:(3-{(1R)-3-(3,4-DIMETHOXYPHENYL)-1-[({(2S)-1-[(2S)-2-(3,4,5-TRIMETHOXYPHENYL)PENT-4-ENOYL]PIPERIDIN-2-YL}CARBONYL)OXY]PROPYL}PHENOXY)ACETIC+ACID'>37L</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FKBP5, AIG6, FKBP51 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tw6 OCA], [https://pdbe.org/4tw6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tw6 RCSB], [https://www.ebi.ac.uk/pdbsum/4tw6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tw6 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tw6 OCA], [http://pdbe.org/4tw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tw6 RCSB], [http://www.ebi.ac.uk/pdbsum/4tw6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tw6 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/FKBP5_HUMAN FKBP5_HUMAN]] Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP.  
[https://www.uniprot.org/uniprot/FKBP5_HUMAN FKBP5_HUMAN] Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:


==See Also==
==See Also==
*[[FK506 binding protein|FK506 binding protein]]
*[[FKBP 3D structures|FKBP 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Peptidylprolyl isomerase]]
[[Category: Almeida OFX]]
[[Category: Almeida, O F.X]]
[[Category: Balsevich G]]
[[Category: Balsevich, G]]
[[Category: Bracher A]]
[[Category: Bracher, A]]
[[Category: Cuboni S]]
[[Category: Cuboni, S]]
[[Category: Fernandez-Vizarra P]]
[[Category: Fernandez-Vizarra, P]]
[[Category: Gaali S]]
[[Category: Gaali, S]]
[[Category: Hartmann J]]
[[Category: Hartmann, J]]
[[Category: Hausch F]]
[[Category: Hausch, F]]
[[Category: Kirschner A]]
[[Category: Kirschner, A]]
[[Category: Kozany C]]
[[Category: Kozany, C]]
[[Category: Namendorf C]]
[[Category: Namendorf, C]]
[[Category: Ruehter G]]
[[Category: Ruehter, G]]
[[Category: Schmidt MV]]
[[Category: Schmidt, M V]]
[[Category: Touma C]]
[[Category: Touma, C]]
[[Category: Uhr M]]
[[Category: Uhr, M]]
[[Category: Fk-506 binding domain]]
[[Category: Hsp90 cochaperone]]
[[Category: Immunophiline]]
[[Category: Isomerase]]
[[Category: Ligand selectivity]]
[[Category: Peptidyl-prolyl isomerase]]

Revision as of 13:58, 15 March 2023

The Fk1 domain of FKBP51 in complex with iFit1The Fk1 domain of FKBP51 in complex with iFit1

Structural highlights

4tw6 is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FKBP5_HUMAN Interacts with functionally mature heterooligomeric progesterone receptor complexes along with HSP90 and TEBP.

Publication Abstract from PubMed

The FK506-binding protein 51 (FKBP51, encoded by the FKBP5 gene) is an established risk factor for stress-related psychiatric disorders such as major depression. Drug discovery for FKBP51 has been hampered by the inability to pharmacologically differentiate against the structurally similar but functional opposing homolog FKBP52, and all known FKBP ligands are unselective. Here, we report the discovery of the potent and highly selective inhibitors of FKBP51, SAFit1 and SAFit2. This new class of ligands achieves selectivity for FKBP51 by an induced-fit mechanism that is much less favorable for FKBP52. By using these ligands, we demonstrate that selective inhibition of FKBP51 enhances neurite elongation in neuronal cultures and improves neuroendocrine feedback and stress-coping behavior in mice. Our findings provide the structural and functional basis for the development of mechanistically new antidepressants.

Selective inhibitors of the FK506-binding protein 51 by induced fit.,Gaali S, Kirschner A, Cuboni S, Hartmann J, Kozany C, Balsevich G, Namendorf C, Fernandez-Vizarra P, Sippel C, Zannas AS, Draenert R, Binder EB, Almeida OF, Ruhter G, Uhr M, Schmidt MV, Touma C, Bracher A, Hausch F Nat Chem Biol. 2014 Dec 1. doi: 10.1038/nchembio.1699. PMID:25436518[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Gaali S, Kirschner A, Cuboni S, Hartmann J, Kozany C, Balsevich G, Namendorf C, Fernandez-Vizarra P, Sippel C, Zannas AS, Draenert R, Binder EB, Almeida OF, Ruhter G, Uhr M, Schmidt MV, Touma C, Bracher A, Hausch F. Selective inhibitors of the FK506-binding protein 51 by induced fit. Nat Chem Biol. 2014 Dec 1. doi: 10.1038/nchembio.1699. PMID:25436518 doi:http://dx.doi.org/10.1038/nchembio.1699

4tw6, resolution 1.40Å

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OCA