4rtm: Difference between revisions

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 <StructureSection load='4rtm' size='340' side='right'caption='[[4rtm]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4rtm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_mds42 Escherichia coli mds42]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RTM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4rtm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._MDS42 Escherichia coli str. K-12 substr. MDS42] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RTM FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2g1p|2g1p]], [[2ore|2ore]], [[4rtj|4rtj]], [[4rtk|4rtk]], [[4rtl|4rtl]], [[4rtn|4rtn]], [[4rto|4rto]], [[4rtp|4rtp]], [[4rtq|4rtq]], [[4rtr|4rtr]], [[4rts|4rts]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rtm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rtm OCA], [https://pdbe.org/4rtm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rtm RCSB], [https://www.ebi.ac.uk/pdbsum/4rtm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rtm ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dam, ECMDS42_2833 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1110693 Escherichia coli MDS42])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rtm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rtm OCA], [http://pdbe.org/4rtm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rtm RCSB], [http://www.ebi.ac.uk/pdbsum/4rtm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rtm ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/DMA_ECOLI DMA_ECOLI] Methylates DNA within the sequence GATC and protects the DNA from cleavage by the restriction endonuclease MboI. Although it shares sequence specificity with a number of type II restriction endonucleases and methylases, it is thought to act in postreplication mismatch repair rather than as a part of a restriction modification system. May also play a role in DNA replication.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
 *[[DNA adenine methylase|DNA adenine methylase]]
-*[[DNA methyltransferase|DNA methyltransferase]]
+*[[DNA methyltransferase 3D structures|DNA methyltransferase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Escherichia coli mds42]]
+[[Category: Escherichia coli str. K-12 substr. MDS42]]
 [[Category: Large Structures]]
-[[Category: Cheng, X]]
+[[Category: Synthetic construct]]
-[[Category: Horton, J R]]
+[[Category: Cheng X]]
-[[Category: Bacterial virulence]]
+[[Category: Horton JR]]
-[[Category: Base flipping]]
-[[Category: Dam methylation]]
-[[Category: Gatc recognition]]
-[[Category: Methylation-independent transcriptional repressor]]
-[[Category: Transferase-dna complex]]