1jvi: Difference between revisions

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[[Image:1jvi.gif|left|200px]]
[[Image:1jvi.gif|left|200px]]


{{Structure
<!--
|PDB= 1jvi |SIZE=350|CAPTION= <scene name='initialview01'>1jvi</scene>, resolution 2.2&Aring;
The line below this paragraph, containing "STRUCTURE_1jvi", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=RHC:5-(3-AMINO-4,4-DIHYROXY-BUTYLSULFANYLMETHYL)-TETRAHYDRO-FURAN-2,3,4-TRIOL'>RHC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= LUXS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
-->
|DOMAIN=
{{STRUCTURE_1jvi|  PDB=1jvi |  SCENE= }}  
|RELATEDENTRY=[[1j98|1J98]], [[1jqw|1JQW]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jvi OCA], [http://www.ebi.ac.uk/pdbsum/1jvi PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jvi RCSB]</span>
}}


'''THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX'''
'''THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX'''
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[[Category: Ruzheinikov, S N.]]
[[Category: Ruzheinikov, S N.]]
[[Category: Sedelnikova, S E.]]
[[Category: Sedelnikova, S E.]]
[[Category: autoinducer synthesis]]
[[Category: Autoinducer synthesis]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 21:58:29 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:39:36 2008''

Revision as of 21:58, 2 May 2008

File:1jvi.gif

Template:STRUCTURE 1jvi

THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX


OverviewOverview

In bacteria, the regulation of gene expression in response to changes in cell density is called quorum sensing. The autoinducer-2 production protein LuxS, is involved in a novel quorum-sensing system and is thought to catalyse the degradation of S-ribosylhomocysteine to homocysteine and the autoinducer molecule 4,5-dihydroxy-2,3-pentadione. The crystal structure of Bacillus subtilis LuxS has been determined at 1.2 A resolution, together with the binary complexes of LuxS with S-ribosylhomocysteine and homocysteine to 2.2 and 2.3 A resolution, respectively. These structures show that LuxS is a homodimer with an apparently novel fold based on an eight-stranded beta-barrel, flanked by six alpha-helices. Each active site contains a zinc ion coordinated by the conserved residues His54, His58 and Cys126, and includes residues from both subunits. S-ribosylhomocysteine binds in a deep pocket with the ribose moiety adjacent to the enzyme-bound zinc ion. Access to the active site appears to be restricted and possibly requires conformational changes in the protein involving the movement of residues 125-129 and those at the N terminus. The structure contains an oxidised cysteine residue in the active site whose role in the biological process of LuxS has not been determined. The autoinducer-2 signalling pathway has been linked to aspects of bacterial virulence and pathogenicity. The structural data on LuxS will provide opportunities for targeting this enzyme for the rational design of new antibiotics.

About this StructureAbout this Structure

1JVI is a Single protein structure of sequence from Bacillus subtilis. Full crystallographic information is available from OCA.

ReferenceReference

The 1.2 A structure of a novel quorum-sensing protein, Bacillus subtilis LuxS., Ruzheinikov SN, Das SK, Sedelnikova SE, Hartley A, Foster SJ, Horsburgh MJ, Cox AG, McCleod CW, Mekhalfia A, Blackburn GM, Rice DW, Baker PJ, J Mol Biol. 2001 Oct 12;313(1):111-22. PMID:11601850 Page seeded by OCA on Fri May 2 21:58:29 2008

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