4pos: Difference between revisions

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 ==Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactosamine==
-<StructureSection load='4pos' size='340' side='right' caption='[[4pos]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='4pos' size='340' side='right'caption='[[4pos]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4pos]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_polyomavirus_9 Human polyomavirus 9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4POS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4POS FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4pos]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_polyomavirus_9 Human polyomavirus 9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4POS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4POS FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PRD_900067:3-sialyl-N-acetyllactosamine'>PRD_900067</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pos FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pos OCA], [https://pdbe.org/4pos PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pos RCSB], [https://www.ebi.ac.uk/pdbsum/4pos PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pos ProSAT]</span></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4mbz|4mbz]], [[4fmi|4fmi]], [[4poq|4poq]], [[4por|4por]], [[4pot|4pot]]</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gp3, vp1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=943908 Human polyomavirus 9])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pos FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pos OCA], [http://pdbe.org/4pos PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pos RCSB], [http://www.ebi.ac.uk/pdbsum/4pos PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pos ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/E9NQ90_9POLY E9NQ90_9POLY]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 18: @@
 </div>
 <div class="pdbe-citations 4pos" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 == References ==
 <references/>
@@ Line 24: / Line 26: @@
 </StructureSection>
 [[Category: Human polyomavirus 9]]
-[[Category: Khan, Z M]]
+[[Category: Large Structures]]
-[[Category: Stehle, T]]
+[[Category: Khan ZM]]
-[[Category: Capsid formation]]
+[[Category: Stehle T]]
-[[Category: Carbohydrate]]
-[[Category: Jelly roll fold]]
-[[Category: Receptor interaction]]
-[[Category: Sialyloligosaccharide]]
-[[Category: Viral coat protein]]
-[[Category: Viral protein]]