4ph8: Difference between revisions

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<StructureSection load='4ph8' size='340' side='right'caption='[[4ph8]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='4ph8' size='340' side='right'caption='[[4ph8]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ph8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o104:h4_str._c227-11 Escherichia coli o104:h4 str. c227-11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PH8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PH8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ph8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O104:H4_str._C227-11 Escherichia coli O104:H4 str. C227-11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PH8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PH8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4or1|4or1]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ph8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ph8 OCA], [https://pdbe.org/4ph8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ph8 RCSB], [https://www.ebi.ac.uk/pdbsum/4ph8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ph8 ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EUAG_05069 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1048254 Escherichia coli O104:H4 str. C227-11])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ph8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ph8 OCA], [http://pdbe.org/4ph8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ph8 RCSB], [http://www.ebi.ac.uk/pdbsum/4ph8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ph8 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Escherichia coli o104:h4 str. c227-11]]
[[Category: Escherichia coli O104:H4 str. C227-11]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Pakharukova, N A]]
[[Category: Pakharukova NA]]
[[Category: Tuitilla, M]]
[[Category: Tuitilla M]]
[[Category: Zavialov, A V]]
[[Category: Zavialov AV]]
[[Category: Beta sandwich]]
[[Category: Cell adhesion]]
[[Category: Donor-strand complementation]]
[[Category: Fibronectin binding]]

Revision as of 16:02, 1 February 2023

Crystal structure of AggA, the major subunit of aggregative adherence fimbriae type I (AAF/I) from the Escherichia coli O4H104Crystal structure of AggA, the major subunit of aggregative adherence fimbriae type I (AAF/I) from the Escherichia coli O4H104

Structural highlights

4ph8 is a 2 chain structure with sequence from Escherichia coli O104:H4 str. C227-11. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Enteroaggregative Escherichia coli (EAEC) is a leading cause of acute and persistent diarrhea worldwide. A recently emerged Shiga-toxin-producing strain of EAEC resulted in significant mortality and morbidity due to progressive development of hemolytic-uremic syndrome. The attachment of EAEC to the human intestinal mucosa is mediated by aggregative adherence fimbria (AAF). Using X-ray crystallography and NMR structures, we present new atomic resolution insight into the structure of AAF variant I from the strain that caused the deadly outbreak in Germany in 2011, and AAF variant II from archetype strain 042, and propose a mechanism for AAF-mediated adhesion and biofilm formation. Our work shows that major subunits of AAF assemble into linear polymers by donor strand complementation where a single minor subunit is inserted at the tip of the polymer by accepting the donor strand from the terminal major subunit. Whereas the minor subunits of AAF have a distinct conserved structure, AAF major subunits display large structural differences, affecting the overall pilus architecture. These structures suggest a mechanism for AAF-mediated adhesion and biofilm formation. Binding experiments using wild type and mutant subunits (NMR and SPR) and bacteria (ELISA) revealed that despite the structural differences AAF recognize a common receptor, fibronectin, by employing clusters of basic residues at the junction between subunits in the pilus. We show that AAF-fibronectin attachment is based primarily on electrostatic interactions, a mechanism not reported previously for bacterial adhesion to biotic surfaces.

Structural Insight into Host Recognition by Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli.,Berry AA, Yang Y, Pakharukova N, Garnett JA, Lee WC, Cota E, Marchant J, Roy S, Tuittila M, Liu B, Inman KG, Ruiz-Perez F, Mandomando I, Nataro JP, Zavialov AV, Matthews S PLoS Pathog. 2014 Sep 18;10(9):e1004404. doi: 10.1371/journal.ppat.1004404., eCollection 2014 Sep. PMID:25232738[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Berry AA, Yang Y, Pakharukova N, Garnett JA, Lee WC, Cota E, Marchant J, Roy S, Tuittila M, Liu B, Inman KG, Ruiz-Perez F, Mandomando I, Nataro JP, Zavialov AV, Matthews S. Structural Insight into Host Recognition by Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli. PLoS Pathog. 2014 Sep 18;10(9):e1004404. doi: 10.1371/journal.ppat.1004404., eCollection 2014 Sep. PMID:25232738 doi:http://dx.doi.org/10.1371/journal.ppat.1004404

4ph8, resolution 1.55Å

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