1vky: Difference between revisions

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<StructureSection load='1vky' size='340' side='right'caption='[[1vky]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1vky' size='340' side='right'caption='[[1vky]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1vky]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1VKY FirstGlance]. <br>
<table><tr><td colspan='2'>[[1vky]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VKY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">QUEA, TM0574 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vky OCA], [https://pdbe.org/1vky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vky RCSB], [https://www.ebi.ac.uk/pdbsum/1vky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vky ProSAT], [https://www.topsan.org/Proteins/JCSG/1vky TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1vky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vky OCA], [http://pdbe.org/1vky PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vky RCSB], [http://www.ebi.ac.uk/pdbsum/1vky PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vky ProSAT], [http://www.topsan.org/Proteins/JCSG/1vky TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/QUEA_THEMA QUEA_THEMA]] Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (By similarity).[HAMAP-Rule:MF_00113]  
[https://www.uniprot.org/uniprot/QUEA_THEMA QUEA_THEMA] Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (By similarity).[HAMAP-Rule:MF_00113]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43589]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Thermotoga maritima]]
[[Category: Isomerase]]
[[Category: Jcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: S-adenosylmethionine trna ribosyltransferase]]
[[Category: Tm0574]]

Revision as of 09:41, 25 January 2023

Crystal structure of S-adenosylmethionine tRNA ribosyltransferase (TM0574) from Thermotoga maritima at 2.00 A resolutionCrystal structure of S-adenosylmethionine tRNA ribosyltransferase (TM0574) from Thermotoga maritima at 2.00 A resolution

Structural highlights

1vky is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

QUEA_THEMA Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (By similarity).[HAMAP-Rule:MF_00113]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vky, resolution 2.00Å

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