4lzf: Difference between revisions

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==A novel domain in the microcephaly protein CPAP suggests a role in centriole architecture==
==A novel domain in the microcephaly protein CPAP suggests a role in centriole architecture==
<StructureSection load='4lzf' size='340' side='right' caption='[[4lzf]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
<StructureSection load='4lzf' size='340' side='right'caption='[[4lzf]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4lzf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LZF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LZF FirstGlance]. <br>
<table><tr><td colspan='2'>[[4lzf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LZF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ld1|4ld1]], [[4ld3|4ld3]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lzf OCA], [https://pdbe.org/4lzf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lzf RCSB], [https://www.ebi.ac.uk/pdbsum/4lzf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lzf ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cenpj ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lzf OCA], [http://pdbe.org/4lzf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lzf RCSB], [http://www.ebi.ac.uk/pdbsum/4lzf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lzf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/STIL_DANRE STIL_DANRE]] Plays an essential role in early embryonic development.
[https://www.uniprot.org/uniprot/E7FCY1_DANRE E7FCY1_DANRE]  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Brachidanio rerio]]
[[Category: Danio rerio]]
[[Category: Cutts, E]]
[[Category: Large Structures]]
[[Category: Erat, M C]]
[[Category: Cutts E]]
[[Category: Hatzopoulos, G N]]
[[Category: Erat MC]]
[[Category: Rogala, K]]
[[Category: Hatzopoulos GN]]
[[Category: Slatter, L]]
[[Category: Rogala K]]
[[Category: Stansfeld, P J]]
[[Category: Slatter L]]
[[Category: Vakonakis, I]]
[[Category: Stansfeld PJ]]
[[Category: Beta-sheet]]
[[Category: Vakonakis I]]
[[Category: Centriole organisation]]
[[Category: G-box]]
[[Category: Protein binding]]
[[Category: Structural protein]]

Revision as of 13:42, 21 December 2022

A novel domain in the microcephaly protein CPAP suggests a role in centriole architectureA novel domain in the microcephaly protein CPAP suggests a role in centriole architecture

Structural highlights

4lzf is a 2 chain structure with sequence from Danio rerio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

E7FCY1_DANRE

Publication Abstract from PubMed

Centrioles are evolutionarily conserved eukaryotic organelles composed of a protein scaffold surrounded by sets of microtubules organized with a 9-fold radial symmetry. CPAP, a centriolar protein essential for microtubule recruitment, features a C-terminal domain of unknown structure, the G-box. A missense mutation in the G-box reduces affinity for the centriolar shuttling protein STIL and causes primary microcephaly. Here, we characterize the molecular architecture of CPAP and determine the G-box structure alone and in complex with a STIL fragment. The G-box comprises a single elongated beta sheet capable of forming supramolecular assemblies. Structural and biophysical studies highlight the conserved nature of the CPAP-STIL complex. We propose that CPAP acts as a horizontal "strut" that joins the centriolar scaffold with microtubules, whereas G-box domains form perpendicular connections.

Structural Analysis of the G-Box Domain of the Microcephaly Protein CPAP Suggests a Role in Centriole Architecture.,Hatzopoulos GN, Erat MC, Cutts E, Rogala KB, Slater LM, Stansfeld PJ, Vakonakis I Structure. 2013 Sep 24. pii: S0969-2126(13)00340-7. doi:, 10.1016/j.str.2013.08.019. PMID:24076405[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Hatzopoulos GN, Erat MC, Cutts E, Rogala KB, Slater LM, Stansfeld PJ, Vakonakis I. Structural Analysis of the G-Box Domain of the Microcephaly Protein CPAP Suggests a Role in Centriole Architecture. Structure. 2013 Sep 24. pii: S0969-2126(13)00340-7. doi:, 10.1016/j.str.2013.08.019. PMID:24076405 doi:http://dx.doi.org/10.1016/j.str.2013.08.019

4lzf, resolution 1.72Å

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OCA