1jer: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1jer.jpg|left|200px]]
[[Image:1jer.jpg|left|200px]]


{{Structure
<!--
|PDB= 1jer |SIZE=350|CAPTION= <scene name='initialview01'>1jer</scene>, resolution 1.6&Aring;
The line below this paragraph, containing "STRUCTURE_1jer", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=CU:Cu+Coordination+And+Putative+Electron+transf.+Site'>CU</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_1jer| PDB=1jer  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jer OCA], [http://www.ebi.ac.uk/pdbsum/1jer PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jer RCSB]</span>
}}


'''CUCUMBER STELLACYANIN, CU2+, PH 7.0'''
'''CUCUMBER STELLACYANIN, CU2+, PH 7.0'''
Line 31: Line 28:
[[Category: Nersissian, A M.]]
[[Category: Nersissian, A M.]]
[[Category: Valentine, J S.]]
[[Category: Valentine, J S.]]
[[Category: copper]]
[[Category: Copper]]
[[Category: electron transport]]
[[Category: Electron transport]]
[[Category: glycoprotein]]
[[Category: Glycoprotein]]
[[Category: hydroxylation]]
[[Category: Hydroxylation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 21:08:04 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:32:37 2008''

Revision as of 21:08, 2 May 2008

File:1jer.jpg

Template:STRUCTURE 1jer

CUCUMBER STELLACYANIN, CU2+, PH 7.0


OverviewOverview

Stellacyanins are blue (type I) copper glycoproteins that differ from other members of the cupredoxin family in their spectroscopic and electron transfer properties. Until now, stellacyanins have eluded structure determination. Here we report the three-dimensional crystal structure of the 109 amino acid, non-glycosylated copper binding domain of recombinant cucumber stellacyanin refined to 1.6 A resolution. The crystallographic R-value for all 18,488 reflections (sigma > 0) between 50-1.6 A is 0.195. The overall fold is organized in two beta-sheets, both with four beta-stands. Two alpha-helices are found in loop regions between beta-strands. The beta-sheets form a beta-sandwich similar to those found in other cupredoxins, but some features differ from proteins such as plastocyanin and azurin in that the beta-barrel is more flattened, there is an extra N-terminal alpha-helix, and the copper binding site is much more solvent accessible. The presence of a disulfide bond at the copper binding end of the protein confirms that cucumber stellacyanin has a phytocyanin-like fold. The ligands to copper are two histidines, one cysteine, and one glutamine, the latter replacing the methionine typically found in mononuclear blue copper proteins. The Cu-Gln bond is one of the shortest axial ligand bond distances observed to date in structurally characterized type I copper proteins. The characteristic spectroscopic properties and electron transfer reactivity of stellacyanin, which differ significantly from those of other well-characterized cupredoxins, can be explained by its more exposed copper site, its distinctive amino acid ligand composition, and its nearly tetrahedral ligand geometry. Surface features on the cucumber stellacyanin molecule that could be involved in interactions with putative redox partners are discussed.

About this StructureAbout this Structure

1JER is a Single protein structure of sequence from Cucumis sativus. Full crystallographic information is available from OCA.

ReferenceReference

A missing link in cupredoxins: crystal structure of cucumber stellacyanin at 1.6 A resolution., Hart PJ, Nersissian AM, Herrmann RG, Nalbandyan RM, Valentine JS, Eisenberg D, Protein Sci. 1996 Nov;5(11):2175-83. PMID:8931136 Page seeded by OCA on Fri May 2 21:08:04 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA