4j7b: Difference between revisions

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==Crystal structure of polo-like kinase 1==
==Crystal structure of polo-like kinase 1==
<StructureSection load='4j7b' size='340' side='right' caption='[[4j7b]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='4j7b' size='340' side='right'caption='[[4j7b]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4j7b]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio] and [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J7B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J7B FirstGlance]. <br>
<table><tr><td colspan='2'>[[4j7b]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio] and [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J7B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J7B FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">plk1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio]), Map205, CG1483 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j7b OCA], [https://pdbe.org/4j7b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j7b RCSB], [https://www.ebi.ac.uk/pdbsum/4j7b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j7b ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polo_kinase Polo kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.21 2.7.11.21] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j7b OCA], [http://pdbe.org/4j7b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4j7b RCSB], [http://www.ebi.ac.uk/pdbsum/4j7b PDBsum]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/MA205_DROME MA205_DROME]] May play an important role in the regulation of microtubule assembly and interaction.
[https://www.uniprot.org/uniprot/Q6DRK7_DANRE Q6DRK7_DANRE]  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Brachidanio rerio]]
[[Category: Danio rerio]]
[[Category: Drome]]
[[Category: Drosophila melanogaster]]
[[Category: Polo kinase]]
[[Category: Large Structures]]
[[Category: Quan, J]]
[[Category: Quan J]]
[[Category: Shen, C]]
[[Category: Shen C]]
[[Category: Wang, T]]
[[Category: Wang T]]
[[Category: Xu, J]]
[[Category: Xu J]]
[[Category: First complex structure of kd and pbd domain]]
[[Category: Phosphorylated target protein]]
[[Category: Regulator of mitosis]]
[[Category: Transferase]]

Revision as of 13:56, 24 November 2022

Crystal structure of polo-like kinase 1Crystal structure of polo-like kinase 1

Structural highlights

4j7b is a 6 chain structure with sequence from Danio rerio and Drosophila melanogaster. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q6DRK7_DANRE

Publication Abstract from PubMed

Polo-like kinase 1 (PLK1) is a master regulator of mitosis and is considered a potential drug target for cancer therapy. PLK1 is characterized by an N-terminal kinase domain (KD) and a C-terminal Polo-box domain (PBD). The KD and PBD are mutually inhibited, but the molecular mechanisms of the autoinhibition remain unclear. Here we report the 2.3-A crystal structure of the complex of the Danio rerio KD and PBD together with a PBD-binding motif of Drosophila melanogaster microtubule-associated protein 205 (Map205(PBM)). The structure reveals that the PBD binds and rigidifies the hinge region of the KD in a distinct conformation from that of the phosphopeptide-bound PBD. This structure provides a framework for understanding the autoinhibitory mechanisms of PLK1 and also sheds light on the activation mechanisms of PLK1 by phosphorylation or phosphopeptide binding.

Structural basis for the inhibition of Polo-like kinase 1.,Xu J, Shen C, Wang T, Quan J Nat Struct Mol Biol. 2013 Sep;20(9):1047-53. doi: 10.1038/nsmb.2623. Epub 2013, Jul 28. PMID:23893132[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Xu J, Shen C, Wang T, Quan J. Structural basis for the inhibition of Polo-like kinase 1. Nat Struct Mol Biol. 2013 Sep;20(9):1047-53. doi: 10.1038/nsmb.2623. Epub 2013, Jul 28. PMID:23893132 doi:10.1038/nsmb.2623

4j7b, resolution 2.30Å

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