190d: Difference between revisions

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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cai, L]]
[[Category: Cai L]]
[[Category: Chen, L]]
[[Category: Chen L]]
[[Category: Rich, A]]
[[Category: Rich A]]
[[Category: Zhang, X]]
[[Category: Zhang X]]
[[Category: Base intercalated]]
[[Category: Dna]]
[[Category: Mismatched]]
[[Category: Parallel-stranded tetraplex]]
[[Category: Quadruple helix]]
[[Category: U-dna]]

Revision as of 13:44, 24 November 2022

Crystal structure of a four-stranded intercalated DNA: d(C4)Crystal structure of a four-stranded intercalated DNA: d(C4)

Structural highlights

190d is a 8 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

The crystal structure of d(C4) solved at 2.3-A resolution reveals a four-stranded molecule composed of two interdigitated or intercalated duplexes. The duplexes are held together by hemiprotonated cytosine-cytosine base pairs and are parallel stranded, but the two duplexes point in opposite directions. The molecule has a slow right-handed twist of 12.4 degrees between covalently linked cytosine base pairs, and the base stacking distance is 3.1 A. This is in general agreement with the NMR studies. A biological role for DNA in this conformation is suggested.

Crystal structure of a four-stranded intercalated DNA: d(C4).,Chen L, Cai L, Zhang X, Rich A Biochemistry. 1994 Nov 22;33(46):13540-6. PMID:7947764[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Chen L, Cai L, Zhang X, Rich A. Crystal structure of a four-stranded intercalated DNA: d(C4). Biochemistry. 1994 Nov 22;33(46):13540-6. PMID:7947764

190d, resolution 1.80Å

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OCA