1iw1: Difference between revisions

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[[Image:1iw1.jpg|left|200px]]
[[Image:1iw1.jpg|left|200px]]


{{Structure
<!--
|PDB= 1iw1 |SIZE=350|CAPTION= <scene name='initialview01'>1iw1</scene>, resolution 1.50&Aring;
The line below this paragraph, containing "STRUCTURE_1iw1", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_1iw1| PDB=1iw1  | SCENE= }}  
|RELATEDENTRY=[[1iw0|1IW0]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1iw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iw1 OCA], [http://www.ebi.ac.uk/pdbsum/1iw1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1iw1 RCSB]</span>
}}


'''Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state'''
'''Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state'''
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[[Category: Shiro, Y.]]
[[Category: Shiro, Y.]]
[[Category: Unno, M.]]
[[Category: Unno, M.]]
[[Category: alpha helix]]
[[Category: Alpha helix]]
[[Category: bacterial iron acquisition]]
[[Category: Bacterial iron acquisition]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: Rsgi]]
[[Category: structural genomic]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 20:29:26 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:25:27 2008''

Revision as of 20:29, 2 May 2008

File:1iw1.jpg

Template:STRUCTURE 1iw1

Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state


OverviewOverview

Crystal structures of the ferric and ferrous heme complexes of HmuO, a 24-kDa heme oxygenase of Corynebacterium diphtheriae, have been refined to 1.4 and 1.5 A resolution, respectively. The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The imidazole group of His-20 is the proximal heme ligand, which closely eclipses the beta- and delta-meso axis of the porphyrin ring. A long range hydrogen bonding network is present, connecting the iron-bound water ligand to the solvent water molecule. This enables proton transfer from the solvent to the catalytic site, where the oxygen activation occurs. In comparison to the ferric complex, the proximal and distal helices move closer to the heme plane in the ferrous complex. Together with the kinked distal helix, this movement leaves only the alpha-meso carbon atom accessible to the iron-bound dioxygen. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediate by preventing premature heterolytic O-O bond cleavage. This allows the enzyme to oxygenate selectively at the alpha-meso carbon in HmuO catalysis.

About this StructureAbout this Structure

1IW1 is a Single protein structure of sequence from Corynebacterium diphtheriae. Full crystallographic information is available from OCA.

ReferenceReference

The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae., Hirotsu S, Chu GC, Unno M, Lee DS, Yoshida T, Park SY, Shiro Y, Ikeda-Saito M, J Biol Chem. 2004 Mar 19;279(12):11937-47. Epub 2003 Nov 26. PMID:14645223 Page seeded by OCA on Fri May 2 20:29:26 2008

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