4e1t: Difference between revisions

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 ==X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis==
-<StructureSection load='4e1t' size='340' side='right' caption='[[4e1t]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
+<StructureSection load='4e1t' size='340' side='right'caption='[[4e1t]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4e1t]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudotuberkulosis"_(sic)_pfeiffer_1889 "bacillus pseudotuberkulosis" (sic) pfeiffer 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E1T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4E1T FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4e1t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E1T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E1T FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4e1s|4e1s]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e1t OCA], [https://pdbe.org/4e1t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e1t RCSB], [https://www.ebi.ac.uk/pdbsum/4e1t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e1t ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">invasin, YPTB1668 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 "Bacillus pseudotuberkulosis" (sic) Pfeiffer 1889])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4e1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e1t OCA], [http://pdbe.org/4e1t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4e1t RCSB], [http://www.ebi.ac.uk/pdbsum/4e1t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4e1t ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/INVA_YERPS INVA_YERPS]] Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins.
+[[https://www.uniprot.org/uniprot/INVA_YERPS INVA_YERPS]] Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 24: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Barnard, T J]]
+[[Category: Large Structures]]
-[[Category: Buchanan, S K]]
+[[Category: Yersinia pseudotuberculosis]]
-[[Category: Cherezov, V]]
+[[Category: Barnard TJ]]
-[[Category: Dautin, N]]
+[[Category: Buchanan SK]]
-[[Category: Fairman, J W]]
+[[Category: Cherezov V]]
-[[Category: Finkelstein, A]]
+[[Category: Dautin N]]
-[[Category: Noinaj, N]]
+[[Category: Fairman JW]]
-[[Category: Przytycka, T M]]
+[[Category: Finkelstein A]]
-[[Category: Udho, E]]
+[[Category: Noinaj N]]
-[[Category: Wei, L]]
+[[Category: Przytycka TM]]
-[[Category: Wojtowicz, D]]
+[[Category: Udho E]]
-[[Category: Adhesin]]
+[[Category: Wei L]]
-[[Category: Cell adhesion]]
+[[Category: Wojtowicz D]]
-[[Category: Integrin]]
-[[Category: Outer membrane beta barrel]]