4dw0: Difference between revisions

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 ==Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 2.9 Angstroms==
-<StructureSection load='4dw0' size='340' side='right' caption='[[4dw0]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
+<StructureSection load='4dw0' size='340' side='right'caption='[[4dw0]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4dw0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DW0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DW0 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4dw0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DW0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DW0 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dw1|4dw1]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dw0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dw0 OCA], [https://pdbe.org/4dw0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dw0 RCSB], [https://www.ebi.ac.uk/pdbsum/4dw0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dw0 ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">p2rx4a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dw0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dw0 OCA], [http://pdbe.org/4dw0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dw0 RCSB], [http://www.ebi.ac.uk/pdbsum/4dw0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dw0 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[[https://www.uniprot.org/uniprot/F8W463_DANRE F8W463_DANRE]] Receptor for ATP that acts as a ligand-gated ion channel.[PIRNR:PIRNR005713][RuleBase:RU000681]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 20: @@
 ==See Also==
-*[[Ion channels|Ion channels]]
+*[[Ion channels 3D structures|Ion channels 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Brachidanio rerio]]
+[[Category: Danio rerio]]
-[[Category: Gouaux, E]]
+[[Category: Large Structures]]
-[[Category: Hattori, M]]
+[[Category: Gouaux E]]
-[[Category: Ion channel]]
+[[Category: Hattori M]]
-[[Category: Transport protein]]