4doy: Difference between revisions

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 ==Crystal structure of Dibenzothiophene desulfurization enzyme C==
-<StructureSection load='4doy' size='340' side='right' caption='[[4doy]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+<StructureSection load='4doy' size='340' side='right'caption='[[4doy]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4doy]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp._xp Rhodococcus sp. xp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DOY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DOY FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4doy]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_erythropolis_XP Rhodococcus erythropolis XP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DOY FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dszC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=229739 Rhodococcus sp. XP])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4doy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4doy OCA], [https://pdbe.org/4doy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4doy RCSB], [https://www.ebi.ac.uk/pdbsum/4doy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4doy ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Unspecific_monooxygenase Unspecific monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.14.1 1.14.14.1] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4doy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4doy OCA], [http://pdbe.org/4doy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4doy RCSB], [http://www.ebi.ac.uk/pdbsum/4doy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4doy ProSAT]</span></td></tr>
 </table>
+== Function ==
+[[https://www.uniprot.org/uniprot/DSZC_RHOSH DSZC_RHOSH]] Catalyzes the first step of the '4S' desulfurization pathway that removes covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) in a stepwise manner.<ref>PMID:16820450</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Rhodococcus sp. xp]]
+[[Category: Large Structures]]
-[[Category: Unspecific monooxygenase]]
+[[Category: Rhodococcus erythropolis XP]]
-[[Category: Gu, L]]
+[[Category: Gu L]]
-[[Category: Liu, S]]
+[[Category: Liu S]]
-[[Category: Zhang, C]]
+[[Category: Zhang C]]
-[[Category: Zhu, D]]
+[[Category: Zhu D]]
-[[Category: Monooxygenase]]
-[[Category: Oxidoreductase]]