8agk: Difference between revisions

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-'''Unreleased structure'''
-The entry 8agk is ON HOLD  until Paper Publication
+==Botulinum neurotoxin subtype A6 cell binding domain in complex with GD1a ganglioside==
+<StructureSection load='8agk' size='340' side='right'caption='[[8agk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8agk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum_str._Iwanei_E Clostridium botulinum str. Iwanei E]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8AGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8AGK FirstGlance]. <br>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8agk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8agk OCA], [https://pdbe.org/8agk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8agk RCSB], [https://www.ebi.ac.uk/pdbsum/8agk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8agk ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[https://www.uniprot.org/uniprot/C9WWY7_CLOBO C9WWY7_CLOBO]]
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Clostridium botulinum neurotoxin A (BoNT/A) targets the soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) complex, by cleaving synaptosomal-associated protein of 25 kDa size (SNAP-25). Cleavage of SNAP-25 results in flaccid paralysis due to repression of synaptic transmission at the neuromuscular junction. This activity has been exploited to treat a range of diseases associated with hypersecretion of neurotransmitters, with formulations of BoNT/A commercially available as therapeutics. Generally, BoNT activity is facilitated by three essential domains within the molecule, the cell binding domain (HC), the translocation domain (HN), and the catalytic domain (LC). The HC, which consists of an N-terminal (HCN) and a C-terminal (HCC) subdomain, is responsible for BoNT's high target specificity where it forms a dual-receptor complex with synaptic vesicle protein 2 (SV2) and a ganglioside receptor on the surface of motor neurons. In this study, we have determined the crystal structure of botulinum neurotoxin A6 cell binding domain (HC/A6) in complex with GD1a and describe the interactions involved in ganglioside binding. We also present a new crystal form of wild type HC/A6 (crystal form II) where a large 'hinge motion' between the HCN and HCC subdomains is observed. These structures, along with a comparison to the previously determined wild type crystal structure of HC/A6 (crystal form I), reveals the degree of conformational flexibility exhibited by HC/A6.
-Authors:
+Crystal Structures of the Clostridium botulinum Neurotoxin A6 Cell Binding Domain Alone and in Complex with GD1a Reveal Significant Conformational Flexibility.,Gregory KS, Newell AR, Mojanaga OO, Liu SM, Acharya KR Int J Mol Sci. 2022 Aug 25;23(17). pii: ijms23179620. doi: 10.3390/ijms23179620. PMID:36077016<ref>PMID:36077016</ref>
-Description:
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
+<div class="pdbe-citations 8agk" style="background-color:#fffaf0;"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Clostridium botulinum str. Iwanei E]]
+[[Category: Large Structures]]
+[[Category: Acharya KR]]
+[[Category: Gregory KS]]
+[[Category: Liu SM]]
+[[Category: Mojanaga OO]]
+[[Category: Newell AR]]